KEGG   Pyxicephalus adspersus (African bullfrog): 140341943
Entry
140341943         CDS       T11284                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
pads  Pyxicephalus adspersus (African bullfrog)
Pathway
pads03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pads00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    140341943 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pads03400]
    140341943 (TDP1)
DNA repair and recombination proteins [BR:pads03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     140341943 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 140341943
NCBI-ProteinID: XP_072284003
LinkDB
Position
12:45404337..45445216
AA seq 595 aa
MSRSSGSQQSSHGKWTLSSSDEESEDVKEPSTSLSVSRERSVPTQFPCSEARKESYKRKS
NPIKFEEKAGKEPSPAKKQKSDREGTGWCLSSSDEESDRKKHKEKASQNLAAPKAARSHS
PIPTKAEKYKTPSDSQDPWDVLQTGEPFRFYLTKVTGIKPKYNTGALHIKDILSPLFGTL
VSSVQFNYCINIPWLVKQYPEEFRNKPLLIVHGEKQESKARLHEEAHPYENIRLCQARLD
MAFGTHHTKMMLLLYEEGLRVVIHTSNLIHDDWHQKTQGIWLSPLYPKLSEGSSSLAGES
ITNFRSDLMAYLASYNSPSLREWIDIIKQHDLSETRVYLVGSTPGRYQGRDKDKWGHLRL
RKILRDKGGSISGVESWPVIAQFSSIGSMGTDHTKWLHSEFGESLKALGNGVKTLPKSEN
PLQLIYPSVDNVRTSLEGYPAGGSLPYSIQTAQKQPWLHSYFHKWKAETSGRSRAMPHIK
TYMRLSPDYQELAWFLVTSANLSKAAWGSLEKSGAQLFIRSYELGVLFLPSAFGFDNGTF
QVKVNVYAKTEDSKATFPVPYDLPPEHYAGKDRPWIWNIPYVNAPDSHGNIWCPS
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgagcagaagttctggctcccagcagagcagccatggaaagtggacattgtctagcagc
gatgaagagtcggaagacgtcaaagaaccatctacctccctatcggtgagcagagagcgc
tcggttcccactcagttcccgtgctctgaagccaggaaagaatcttacaagagaaagtca
aatccaataaagtttgaagagaaggcaggtaaagagccatcaccagccaaaaaacagaaa
tcagacagggagggcacagggtggtgcctctccagcagtgacgaggagtctgacaggaag
aaacacaaagagaaggcttcccaaaatctggcagctccaaaagcagcgaggagtcacagc
ccgattccaaccaaagctgagaaatataaaactcccagtgactctcaggacccttgggat
gttctacagactggggaacctttccgcttctacctgaccaaagttactggcatcaaaccc
aaatacaacactggtgcccttcatattaaggatatcctctctcctctgtttgggacgttg
gtatcttcagtgcagtttaactactgcataaatatcccatggctggtgaaacaatatcca
gaggaatttcgaaataaaccattgttgattgtacatggggagaaacaggaatccaaagcc
cgtttacatgaggaagcccatccatatgaaaacatccgcctgtgtcaggccaggctggat
atggcctttggtacccaccacacaaagatgatgttgctgttatatgaagaaggtctgcga
gtggttatacacacaagcaatctaattcacgatgactggcaccagaagactcaggggatc
tggttgagtccactttatcctaagctatcagaaggttcctcctctctagcaggggaatca
atcaccaacttcaggtctgacctcatggcatacttggcatcatacaactccccaagctta
cgtgaatggatcgatatcataaaacagcatgatctgtcagagaccagggtatatcttgtt
ggatctacacctggaagatatcaaggccgtgataaagataaatggggacatttacgttta
agaaagatattacgagacaaaggtggatctatctcaggtgttgaatcgtggcctgtgatt
gcccagttttccagtattggttcaatgggaacagatcataccaagtggcttcactctgag
ttcggcgagagcctgaaggcattggggaacggggtgaaaacccttccaaaatcagagaat
cctcttcagctgatttacccatcagtggacaatgtcagaacaagtctggaaggttaccct
gcgggaggatctctgccttacagcatccagactgcccagaaacagccgtggctccattct
tacttccacaaatggaaagcagagacatccggacgtagtagagctatgccccacatcaag
acctacatgcgcctatccccagactaccaggagctggcctggttcctagtgacaagtgca
aatctgtcaaaagcagcatggggttccctggagaagagcggtgcccagctgtttatccgc
tcctatgagctgggagtcctcttcctgccatctgcctttggcttcgataatggaacattc
caggttaaggtcaatgtctatgccaaaaccgaagactcaaaagcaacattccctgtgcct
tatgaccttcctccggaacactatgcaggaaaagacaggccgtggatctggaatattccc
tatgtcaatgccccggattcacatgggaatatctggtgtccgtcatag

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