Pyxicephalus adspersus (African bullfrog): 140342477
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Entry
140342477 CDS
T11284
Symbol
COPA
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
pads Pyxicephalus adspersus (African bullfrog)
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pads04131
]
140342477 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pads04147
]
140342477 (COPA)
Membrane trafficking [BR:
pads04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
140342477 (COPA)
Exosome [BR:
pads04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
140342477 (COPA)
Exosomal proteins of bladder cancer cells
140342477 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
140342477
NCBI-ProteinID:
XP_072284775
LinkDB
All DBs
Position
12:3492658..3513386
Genome browser
AA seq
1030 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDSD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNILYXVKDRFLRQLDFNSSKDVAVMQLRRC
SVFSDHGIIRTLDLPIYITRVKGNNVYCLDRECRPRVLTIDPTEFKFKLALINRKYDEVL
HMVRKAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEIALEAAKALDDKS
CWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMMKIAEIRKDMSGQ
YQNALYLGDIDERVRILKNCGQKSLAYLTAATHGITDEEEKLRESFDPEKEIIPEVDPDA
KLLLPPPPVMPLDTNWPLLTVSKGFFEGTIASKAKGLAADIDIETVGGEGWGEDAELQLD
EDGFVDAGDTFGDEAPGKGQEEGGGWDVEEDLDLPPELDVPSGPSGTGEDGFFVPPTKGS
SPAQMWCNNSQLPVDHILAGSFETAMRLLHDQVGVVNFGPYKQHFLHTLSRGRTTFQALP
GLPSMYGYPQRNWKDSGLKNGLPAVGLKLSDLIQRLQLCYQLTTSGKFEEAVEKFRLILL
SIPLLVVDNKQEISEAQQLITICREYIVGLSMEIERKKLPKDTLEQQKRICEMAAYFTHC
SLQPIHMILVLRTAVNLFFKLKNFKTAAVFARRLLELGPKPEVSQQTRKILAACEKNLTD
TYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEYKGQTCRVTTVTEIGKDVI
GLRISPLQFR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgctgactaaattcgagactaagtccgcccgggtgaagggtctgagctttcaccccaag
cgaccatgggtgctcaccagcctgcacaacggcgtcatccagctgtgggattaccgcatg
tgcaccctcatagacaagttcgatgaacacgatggcccagtccgtggtattgattttcat
aagcagcagccattgtttgtctccgggggagatgactacaagatcaaggtctggaattat
aaactgcgacgttgtctgttcactctgctgggtcacctagattacatccgcaccaccttc
ttccatcatgaatacccctggatcctcagtgcctccgacgatcaaaccatccggatctgg
aactggcagtctcgcacttgtgtctgtgttctgacgggtcacaaccactacgtaatgtgc
gcccagttccacccatcggaagatctggtagtttctgccagcttggaccagacagtgcgc
gtttgggatatttctggcctgcgtaaaaagaacctttcacccggagcggtggactccgat
gtccgtggaatcaccggagtagatttgtttgggaccaccgacgcggtggtgaaacatgtt
ctggagggtcatgatcgtggtgtaaactgggctgcattccaccccaccatgcccctcatt
gtctcaggagccgatgaccggcaggtgaagatctggagaatgaacgaatccaaggcctgg
gaagtggacacttgccgcggacattacaacaacgtctcctgcgccgtctttcaccctcgt
caggagctgatcctgagtaattctgaagataagagcatccgcgtctgggatatgtccaag
agaaccggagtccagaccttccgcagagaccacgatcgcttttgggttctggctgctcat
cccaatcttaacctgtttgcagcaggacacgacggaggaatgattgtgtttaagctggaa
agggaacggccagcctatgccgtccacgggaatatcctgtactaggtcaaagaccgtttc
ctccgccagctggatttcaacagctccaaggatgtggccgtcatgcagcttagaaggtgt
agtgttttcagtgaccatggcatcatccgtaccttggatctgcccatctacatcacccgc
gtgaagggtaacaacgtctactgtctggaccgggagtgccgcccacgggtgctcaccatt
gaccctacagaatttaaattcaaactggccctgattaataggaagtatgatgaggtgctg
cacatggtgagaaaggccaagctggtaggacagtcaatcattgcttacttgcagaagaaa
ggttaccccgaggtggcattgcactttgtaaaagatgaaaagacacggttcagcctggct
ctggagtgtggaaatattgagattgctttagaagctgcaaaggctttggatgacaagagc
tgctgggagaagctgggcgaggtggccttgctgcagggcaaccatcagatcgtagaaatg
tgctaccagcgcaccaagaatttcgataagctctccttcctttatcttattactggaaat
ctggagaaactacgcaaaatgatgaagatcgctgagatccgtaaggacatgagcgggcag
taccagaatgccctgtacctgggagatattgatgagagagtgaggatcctcaagaactgc
gggcagaaatccctggcttatctgactgcagccacacatggcattacggatgaggaagag
aaactgcgggaatcctttgacccagagaaggaaattatcccagaagtagatccagatgca
aaacttctgctgccacctcctccagttatgccactagataccaactggcctctgctgact
gtgtccaaaggcttctttgaaggaaccatagcaagtaaagccaaaggtttggcagcagat
atcgacatagaaactgtgggaggagaaggctggggagaagacgctgagcttcagttggat
gaagatggctttgtggatgcaggagacacatttggagatgaggctcctggaaagggacag
gaagaaggtggtggatgggacgtggaagaagatctggatcttccccctgaattggatgtt
ccctctggcccatcaggaacaggagaagatggcttctttgtgccacccaccaagggcagc
agcccagcacagatgtggtgtaacaattcccagcttcctgtggatcacatcttggccggt
tcatttgaaacagcaatgcggctccttcatgatcaggtgggagtggtgaattttggtcca
tacaagcaacatttcctccatacgctttcccgaggacgtaccaccttccaggctttgccg
ggacttccgtccatgtatggctacccacagcgtaactggaaggactcggggttgaagaat
gggctacctgcggtgggtctgaagctcagcgatctcatccagcggctccagctctgctac
caactcactacatctggcaagtttgaagaggcggtggagaagttccgcctgattctgctc
agtattccccttcttgtggtggacaacaagcaggagatctccgaggctcagcaactgatc
accatttgcagagaatatattgtaggattgtccatggaaattgagcgaaagaaacttcca
aaagataccctggagcagcagaaaaggatctgtgagatggcagcctacttcacacactgc
agcctgcagcccattcacatgatcctggtgctcagaacggccgtcaacctcttcttcaaa
ctcaagaacttcaaaacagccgctgtattcgccaggcggctgctagaactggggcccaaa
cccgaagtgtcacagcagacccgtaagatcctagcagcatgtgagaagaacctcaccgac
acgtaccagctcaactacgacatgcacaaccccttcgacatttgtgctgcctcctacagg
cccatttaccgggggaaaccagtggagaaatgtccactcagcggagcctgctacagcccg
gagtacaaaggacagacctgcagagtcactacagtcacagaaatcggaaaagatgtgatc
ggtctgcggatcagccccctccagttccgttaa
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integrated database retrieval system
