Pyxicephalus adspersus (African bullfrog): 140342868
Help
Entry
140342868 CDS
T11284
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
140342868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pads03000
]
140342868
03036 Chromosome and associated proteins [BR:
pads03036
]
140342868
Transcription factors [BR:
pads03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
140342868
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
140342868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
Helicase_C
Motif
Other DBs
NCBI-GeneID:
140342868
NCBI-ProteinID:
XP_072285340
LinkDB
All DBs
Position
W:6277688..6416084
Genome browser
AA seq
1909 aa
AA seq
DB search
MSDDINCDADGMDEQCRWCAEGGYLICCDFCHNAFCKTCILRNLGRKKLSTIMDEESQWQ
CYICQPEPLLDLVAACDSVFENLEQLLQQNKRKIKLENNKSKPCEQNLKNSSCNGPEKLC
PSYSGALTYSYKALMVPKEMLKKAKRIIETTTNLNKSFIKFLKRESENVVITSNTRIRQL
KAFKSVLGDLKSAHGALEEGLAFELASALSQASLKKSKDVTSELKLQKEKKDKGSEPQIT
TSNVQDGVKMTYCNDSEKHKASEESLGDEEDGLFKHTGKQIEVEIDDVEDLQDSMVEDPE
MSSTKRTVDVAYMQLVEDLEKIENRTCSDICQKERGSVQEPFFADSSSDFEGKSNQSEQD
GKKKGTKRPKRTFGERSTEIARKEPVSSAESKDENYSVTKSELLLEPNCGKALDMDIVSV
PTSVPEDIFDSLDSAVEAQNVYAIKTRNGDEQETKTYVKKELILKLTPISFSKGLKSSDR
TPTKKAKGFVSDGEARSSSKGHSSENEDSKFRKSPRVKTTPKRRQNESVSSSNTKEESNA
EGKMFKSESSKMETQQEVSPSGSAVISKSKKLDEKYLKGGSDSDKVPEILNMAALRTNYS
SEPDSGSEDKRTKERDVQIVGEKRKRKSTNVTKRNTRLSTAAKKLCPEFSDSSNYDSELE
EEIRKLGKIEHAKKSPKKTKLYENGSSVERYPKKHKSDKPTQRRSKAIKCRNHSASSSDL
SEDGHENSSHNSKNGSEDEQKIKPLVENESLIKTEFYQSSGDEAGTKFGTAEDEEDGDPE
NRIAKKMLLQEIKANLSSDDEVSSEEGNNEKVKFREDCHDSMSSDESASKSSDVGDSDDQ
RPRTRAAKEENQRRRIKVQEDSSDSKGNSGDHDEDSDSKSPGKGRKKIRRIIKDDNLRTE
TQNALKMEEERRKRIAEKEREREKLREQHDGLLASQVIIMEDFSPVACPITTKLVLDEDE
ETKEPLVQVHSNLVTKLKPHQVDGIQFMWDCCCESVMKTKKESGSGCILAHCMGLGKTLQ
VVSFLNAVLLNDKLNFSSALVVCPLNTVLNWTNEFEKWQDGLKDEEKLEVTELATIKRPQ
ERGYMMQHWHEDGGVLIIGYEMYRNLTQGRNVKSKKLKELYHKMLVDPGPDFVVCDEGHV
LKNEASAISKAMNSIRTKRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINP
IQNGQCADSTMADVRVMKKRAHILYEMLAGCVQRKDYTALTQFLPPKYEYVLSVRMTPIQ
CKLYRYYLDNLTGAAVEGGGGRGKSGTKLFQDFQILSRIWTHPWCLQLDYISKENKGYFD
EDSNEEFVVSDSEETTPSLSSEDETIMKKSKGKGKNSSSSSEEESDREVEVIKVWNSRSR
GGNPRDSKEGTANTSVVKVEESKATSSSTPGSPAPDWHKDFVTEADAGVLEHSGKICLLF
EILRMAEELGDKVLVFSQSLISLDLIEDFLELASLEKTEEGAEPGPIVYKGEGKWFRNID
YYRLDGSTTAQTRKKWAEEFNDVTNVRGRLFLISTKAGSLGINLVAANRVIIFDASWNPS
YDIQSIFRVYRFGQTKPVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMN
ELTELYTFEPDLMDDSNPEQRRGREIPKLPKDTVFAELLQICKENIVTYHEHDSLLDHKE
EEELTEEERKAAWDEYEAEKKGFTSRFNIGTVTGINYAQINYNSTQSPYMPLNLGALSAL
NNQQLEDLINQGREKVVEATNSIASARIQPLEDIIATVWKDNPTFTELQAQSLALSRQSS
QELEIKRREAVYNDVLSKQQMLISCVQRILMGRRLQQQYNQQQQQQIAMQQQAALNCLIM
QKSPNIILNPANYRQIDMQGLYQNLQGHHMQRAPPPIRAKPGSSQGKKI
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgacatcaactgtgatgctgatggtatggatgaacagtgcaggtggtgtgca
gaggggggatatcttatttgttgtgatttctgccacaatgccttctgcaaaacctgcatc
ctacggaatcttggccggaaaaagctgtctactattatggatgaagaaagccaatggcaa
tgttatatttgccagcctgaacctttgttggacttggttgcagcttgtgacagtgttttt
gaaaacctagagcaattgttgcagcaaaataaaaggaaaattaagttagaaaacaacaag
agcaagccttgcgaacaaaacttaaaaaactcaagctgtaatgggccagaaaaactgtgt
ccttcctattctggtgcgctaacctattcttacaaggcgctaatggtgcctaaagaaatg
ttaaaaaaagcaaaaagaataattgagaccacaaccaatttaaacaagagctttatcaag
tttctgaaacgggaatctgaaaatgtggttattacctccaatactagaatacgacagtta
aaggcatttaagtctgtcttgggcgacttgaagagcgcacatggtgctttggaggaaggt
ttggcttttgagcttgcatctgcactgagccaagcctctttaaagaaaagcaaagatgtg
accagtgagctaaaactgcaaaaagagaaaaaagataagggcagtgaaccccagatcaca
acatctaatgtacaagatggtgtaaagatgacttattgtaatgacagtgaaaagcacaaa
gcatctgaagagagccttggggatgaggaggatggtttgtttaaacatactgggaagcag
attgaagtggagatagatgatgtggaagacctgcaggacagcatggtggaagatccagaa
atgtcctctacaaagaggactgtagatgttgcttatatgcagcttgtagaagaccttgag
aaaatagaaaatagaacttgttcagatatttgtcaaaaagagaggggttcagtacaggaa
cctttttttgctgacagcagttcagattttgaagggaagagcaatcaatccgaacaagac
ggaaagaaaaagggtactaaaaggccaaaacgcacttttggtgagaggagcacagaaata
gctagaaaggagccagtgtctagtgcagagtctaaggatgaaaattattcagttaccaaa
agtgaacttttattggaaccaaactgtggaaaagctcttgatatggacatagtttctgtt
cccacttcagtccctgaagacatatttgacagtttggattctgcagtggaggcacaaaat
gtttatgctataaaaacaagaaatggagatgaacaagaaaccaaaacttatgttaaaaag
gaattgattttgaaattaactccaatatctttctccaagggattgaagagttctgatagg
actccaacaaagaaagcaaaagggtttgtgagtgatggtgaagctagaagctctagtaaa
gggcattcatctgagaatgaagactccaagttcagaaaatctccacgtgttaaaacgaca
cccaagcgacgccagaatgaatctgtgagctcatcaaatacaaaggaggaaagtaatgct
gaaggcaaaatgtttaaaagtgagtcctcgaagatggaaacacaacaggaggttagcccc
tcgggcagtgctgtaatttcaaaaagtaaaaaactagatgaaaaatatcttaaaggtggt
tctgattctgacaaagtgccagaaatcctcaacatggcagctttgaggaccaactactca
tctgaacctgacagtggctctgaggacaagaggaccaaagagagagacgttcaaatagtt
ggtgaaaagagaaaaaggaaaagcactaatgtgacaaaaagaaatactagactttctaca
gctgctaaaaagctgtgcccagaattttctgattcttccaactatgactctgagctagaa
gaagaaattcgtaagttgggaaaaattgagcatgctaagaaatccccaaagaaaactaaa
ctctatgaaaatggctcatctgtggaaagatacccaaaaaaacacaagagcgataagccc
actcagaggcgcagcaaggcaattaaatgcaggaaccattctgcttcatcttctgacttg
tctgaggatggccatgaaaattcaagtcataattcaaaaaatggcagtgaggatgagcaa
aagatcaaacccttagtagaaaacgaatctctgataaaaactgagttctaccagtcatca
ggcgatgaagcggggactaaatttggcactgcagaggatgaggaagacggtgatcctgag
aataggatcgccaagaaaatgcttctgcaggaaataaaagccaatttatcatctgatgat
gaagtgtcctctgaagaaggcaataatgagaaggtgaaatttcgggaagactgccatgat
agcatgagcagtgatgaatctgcaagcaagagctctgatgttggcgactcagatgatcag
cgacccagaaccagggcagcaaaggaggagaaccagaggaggcggattaaagtgcaggaa
gactccagtgattccaagggtaattcaggggaccacgatgaagactctgattctaaatct
cccggaaaaggacggaagaaaatccggagaataataaaagatgacaatttgagaacagaa
actcagaatgcgttaaaaatggaagaagagagaaggaaaaggattgcagaaaaagagcga
gagcgggaaaagctgagggagcagcatgatggtcttctggcttctcaggtcattatcatg
gaagatttttcacctgtagcgtgcccaattaccaccaaactggttctagatgaagatgaa
gagacgaaagaacctttagttcaggttcacagcaacttggtaaccaagctgaaacctcac
caggttgacggtattcagttcatgtgggattgctgctgtgagtctgtgatgaagacaaaa
aaggaatctggctctggatgtatattggcccattgtatgggtcttggaaagactctgcag
gtggtgtctttccttaacgctgtccttcttaatgacaagctgaattttagctctgccctt
gtagtctgtccattaaatacggttttaaattggacaaatgaatttgaaaagtggcaagat
ggcctgaaggatgaggagaagctggaggttacagaactggccaccattaagcgccctcag
gaacgagggtatatgatgcagcactggcatgaagatggaggagtactaataattgggtat
gaaatgtacagaaacctaacgcaaggaaggaatgtcaagagcaaaaagctgaaggaactt
taccacaagatgctggtggatcccggtccagactttgttgtgtgtgatgaaggtcatgtg
cttaaaaatgaagcctctgcaatttctaaagctatgaattctataaggaccaagcgaaga
attatcctgactgggacacctctgcagaataacttggtagaatatcattgcatggtgaat
ttcatcaaggaaaacttgcttggctccataaaggaattccgcaatcgctttataaacccc
atccagaacgggcaatgcgcggactccacaatggccgacgtcagggtgatgaagaaacga
gctcacattctctatgaaatgttggctggatgtgtacagcgaaaagattacacggcactg
acacagtttttacctccgaaatatgaatacgttctgtctgtccgaatgacgccaatacag
tgtaaactctatcggtactatctggataatttaacaggtgctgctgttgaaggaggagga
ggtcgaggtaaatctggaaccaaacttttccaggactttcagattttaagtaggatctgg
actcacccttggtgcttgcagctggactatattagtaaggaaaataagggttactttgat
gaagacagcaatgaggagtttgtggtgtcagattctgaggaaaccacgcccagtctgagt
tcagaagacgaaaccatcatgaagaaatcaaagggaaaaggcaagaactcgagcagttcc
agtgaggaggaaagtgaccgggaagtggaagtcattaaggtgtggaattctcggtcccgt
ggtggcaatccaagggactccaaggaggggactgcaaacacttctgtggtcaaggtggaa
gaaagcaaagccacatcatcctccactccaggcagtccggctcctgactggcacaaagac
tttgtgacagaagcagacgctggtgtgctggagcattctggaaagatctgccttttgttt
gagattcttcgcatggcagaggagctaggtgataaagttttagtttttagccaatcgctc
atttcattggacctgattgaagattttctagagttggcaagtttggaaaaaactgaagaa
ggagcagagcccggaccaattgtatataaaggtgaggggaagtggttcaggaatattgac
tactaccgactagatggttcaaccactgctcagacaaggaagaaatgggctgaggagttc
aatgatgtcaccaatgtgaggggacgtctgtttctcatttctacaaaggctggatccctt
ggcataaatctagtggctgctaatcgtgtaattatctttgacgcgtcatggaatccatct
tatgatatacagagtatcttcagggtttaccgattcggccaaactaagccagtcttcgtg
tacaggtttttggcacagggcaccatggaagaaaagatctatgatcgccaggtcacaaag
caatccttgtcatttagggtcgttgaccagcagcagatagaacgtcacttcacaatgaat
gagcttacagagctgtacacatttgagccagatctaatggatgactccaatcctgaacag
aggagggggagggagatccccaagctgccaaaggacactgtatttgctgagctgctgcag
atctgtaaagagaatatagtcacctaccatgaacatgattccctcctggaccacaaagag
gaagaggagttaacagaagaggagaggaaagcagcttgggatgaatatgaagctgaaaag
aaggggtttaccagtcgctttaacattggaactgtaactgggattaattatgctcaaatc
aattacaactctactcagtctccttatatgccattaaacttgggagcattgtctgcactg
aataatcagcaactggaagatctgattaaccaaggacgagagaaagtggttgaagctaca
aatagcattgcatctgctaggattcagcctctagaggacattattgcaacagtgtggaag
gacaatcctacctttacagagttgcaggctcagtcactggctctaagcaggcaatcaagc
caagagttggagatcaagagacgtgaagccgtttacaatgatgttctgtccaagcagcag
atgttaatcagctgcgtccagcgaatattgatgggccgaaggttacagcagcaatataac
cagcagcaacaacaacagatagctatgcagcagcaagcagcgctgaactgtctgataatg
caaaagtctccaaacatcattctgaacccggctaactatcggcaaattgacatgcaagga
ctgtatcaaaatctccagggccaccacatgcagagagcaccgcctcctattagagcaaaa
cctggatcttcccagggcaaaaaaatctga
DBGET
integrated database retrieval system
