Pyxicephalus adspersus (African bullfrog): 140343278
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Entry
140343278 CDS
T11284
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140343278 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pads01007
]
140343278 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pads03016
]
140343278 (VARS1)
Enzymes [BR:
pads01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
140343278 (VARS1)
Amino acid related enzymes [BR:
pads01007
]
Aminoacyl-tRNA synthetase
Class I (U)
140343278 (VARS1)
Transfer RNA biogenesis [BR:
pads03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
140343278 (VARS1)
Prokaryotic type
140343278 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
Motif
Other DBs
NCBI-GeneID:
140343278
NCBI-ProteinID:
XP_072285981
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All DBs
Position
Z:complement(12126856..12152720)
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AA seq
1247 aa
AA seq
DB search
MSTLYLPLSSTSDPRCTWVRVSGQFSPHPRPEVQEVASGPRGLPLPCLLSPSTGSVWGAW
AVSYMLAPESLSGCGEQRSFSLIKQWVNYAESEVLPAAYGVDHKPTKDRAHVELQRILEV
LDSHLKVRTYLVGERLSLADIAVSCCLIHPFSKVISPSTQETFTNVTRWFLTCVHQPQFK
EIVGEVTLFNGDLKSESPKTPPAPTSTATVVNGPPKTAAQLKKESKKKEKLEKFQQKQEK
IKVQQTEKKPKAEKKEKKELGVIVYDIPTPAGQKKDVSSAMPDSYSPQYVEAAWYSWWEK
EGFFKPEYGRTSISEPNPKGMFMMCIPPPNVTGSLHLGHALTNAIQDSLTRWHRMPGELT
LWNPGCDHAGIATQVVVEKKLWREHKKTRHDLGREAFIDEVWKWKNEKGDRIYHQLKILG
SSLDWDRACFTMEPKLSHAVQEAFVRLHEAGVIYRSKRLVNWSCTLNSAISDIEVDKKEL
TGRTVLPVPGYKEGVEFGVLVSFAYKVQDTDEEVVVATTRVETMLGDTAVAVHPQDQRYQ
HLKGKSVVHPFANRLLPIVFDEFVDMSFGTGAVKITPAHDQTDYEVGLRHSLDFINIMDD
NGLLVNVPKTFLGMKRFEARKAVLEALKEKGLFKEIKDNPMVVPVCSRSKDIVEPLVKPQ
WYVRCDEMGKKAADAVRDGQLAIKPEFHNKTWFSWMDNIRDWCISRQLWWGHRIPAYFVT
INDPSVPAGEDTDGKYWISGRSEEEARQKAAKQFNVAPEKVSLKQDEDVLDTWFSSGIFP
FSIFGWPNESEDLNVFYPGTLLETGHDILFFWVARMVMLGLTLTGKLPFKEVYLHAIVRD
AHGRKMSKSLGNVIDPLDVIKGITLEGLHSQLLESNLDPAELERAKEGQKSDYPTGIPEC
GTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAMRGLGDKFIPPDSSLPT
GQESLVDHWILSRLSLAVDLCNTGFQNYDFPGITTAVYNFWLYDLCDVYLECLKPVFAGS
DEIAIAVARNTLYTCLDVGLRLLSPFMPFLTEELYQRLPRRSSEQFPSITVAPYPETAEF
HWHNEETERKMDLALLIVKSIRSLRADYNLTKTKADCFVRCEDADTRSVVAAYSLYITVL
SSSRSLVIMMPEDPAPEGSAVNTASDKATVYLILKGLIDVEKELAKLQVKKTELSRQLEK
LRERISGADYRKKVPPTVQQQDADKMKQFETEYQKVEEALSSFQKMV
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtccactctctaccttcctctgtcttctacctcagacccccgatgcacctgggtgcga
gtctctggacagttctccccgcaccctcgcccagaggtgcaggaagttgcctccgggcct
cggggtcttccactgccgtgccttctatccccctccactggatctgtatggggggcttgg
gctgtctcttacatgctggcccctgaatctctctcagggtgtggagaacagcgaagcttc
tcacttatcaaacagtgggtaaactatgcagaatctgaagtgctgccagctgcctatggg
gtggatcacaaaccgactaaagaccgcgctcatgtggaattacagagaattctcgaggtg
ctggacagtcacttgaaagtacgcacgtaccttgtaggggaacgtctgagcctagctgac
attgcagtttcctgttgtcttatccatccttttagcaaggtcatctctccctccacccaa
gagactttcaccaatgtcacccgctggttcctcacctgtgtccaccaaccacagtttaag
gagattgtaggagaggtgacattattcaatggagacctcaagagcgagagtcccaaaacc
ccacccgccccaaccagcactgccactgttgtcaatggtcctcccaaaacagccgcccag
ttaaagaaagagtccaagaaaaaagagaagttggagaagttccagcagaaacaagagaaa
ataaaagtacagcagacagagaaaaaaccaaaggcagaaaagaaagagaagaaggaactt
ggtgtgatagtctatgatatcccaactcctgctggacagaagaaggatgtttctagtgct
atgccagattcatacagtcctcaatatgttgaggcagcctggtattcatggtgggaaaag
gaagggttctttaagccagaatatgggagaaccagcatctcagagcccaatcctaaaggc
atgttcatgatgtgcattcctccaccaaatgtcactggatctcttcatttgggccatgct
ctgactaatgccatccaagacagcctgactcgttggcatcgaatgcctggagagctgacc
ttgtggaacccaggctgtgaccatgctggaattgccacccaggtagttgtagaaaagaag
ctttggagagagcacaaaaaaacccggcatgatctgggccgagaagcatttatagatgaa
gtgtggaagtggaagaatgaaaaaggtgaccgaatctatcaccaactgaagattctgggt
agttcattggattgggatagagcttgtttcaccatggagccgaaactatcacatgctgta
caggaagcctttgtccgtctgcacgaagctggagtgatctatcgaagcaaaaggcttgtc
aactggtcatgtacgctgaactctgccatatcagacatagaggtagacaagaaggaactg
actggtcgtactgtattgcctgttcctggatacaaggaaggtgtggagtttggagtgctg
gtttcctttgcttataaagtacaagatacagatgaagaggttgtggtagccacaactcga
gtggaaaccatgcttggtgacacagcggtggccgttcatccccaagatcagcgctatcag
catctgaaaggaaagagcgttgttcatccgtttgccaacagactacttccgattgtcttt
gatgagttcgtagatatgagctttgggacaggagcggtgaagattactcctgctcatgat
cagactgattacgaggtggggctgcgacactccttggattttatcaacattatggatgac
aatggtctgctggtcaatgtgcccaaaacattcttgggtatgaagcgctttgaggctaga
aaagcggtcttagaagctctcaaagaaaagggtctgtttaaggagataaaggacaatcct
atggtggtccctgtatgcagccgatccaaagatattgtggagcctctagtgaagcctcag
tggtatgtgcgctgcgatgagatggggaagaaggcagcagacgctgtgcgtgatggacaa
ctcgcaatcaaacctgaattccacaacaagacctggttcagttggatggacaacattagg
gattggtgtatatcaaggcagctgtggtggggtcaccgaattccagcctactttgtcact
atcaatgacccttcagtacctgcaggagaggacacagatggcaagtactggatcagtggt
cgctcagaggaggaagcaagacaaaaggcagctaaacagttcaacgtggctcctgaaaaa
gtgtcacttaaacaggatgaggatgtgcttgacacgtggttttcttctggtatcttcccc
ttctccatctttggttggcccaatgagagtgaggatctgaacgtcttctacccgggaaca
ctcctagagaccggacatgatatcttgttcttctgggtggctcgaatggtgatgcttggc
ctcacactgactgggaaattaccctttaaagaggtgtatctgcacgctatagtacgtgat
gctcatgggcgtaaaatgagcaagtcccttggaaatgtcattgatccattagatgtgatc
aaaggaataactctggagggcctgcactcccagctgctggagagtaacttggatcctgcc
gagctggagagagccaaggaaggacagaaatctgattatcccaccgggatccctgaatgt
gggacagacgccctgagatttgctttgtgcgcctacactagtcaaggccgtgacattaat
ctggatgtgaacaggatcctgggttaccgtcacttctgtaacaaactctggaatgcaaca
aagtttgccatgcgcggcctgggagataaattcatacccccagactcatcattgcccacc
ggacaggaaagtttggtagatcactggattctgagtcggctcagtctggcagttgatctg
tgtaacactggcttccagaattacgacttcccaggaattacaacggcagtgtacaacttc
tggctctatgatctctgtgatgtctacctggagtgtttaaagcctgtttttgctggctca
gatgaaatcgccatcgccgtagcacggaatacattgtacacatgtctggacgttgggctc
cgtctgctctctccctttatgcctttccttacagaagagctttaccagcgccttccccga
agatcctccgagcagttccccagcatcactgttgctccttatcctgaaaccgctgagttt
cattggcacaatgaagaaactgagaggaagatggatcttgcattgcttatagtgaaatcc
atcaggtctctgcgggctgattataatctcaccaagacaaaagctgactgttttgttagg
tgtgaggatgccgacaccaggtctgtggttgctgcttattctttgtacatcactgtcctg
tcctcttcccgctctctggtgatcatgatgcctgaggaccctgcaccagaaggaagtgct
gtaaacacggcatctgataaagccaccgtctaccttattctcaagggtcttattgatgtg
gaaaaagagctggcaaagctgcaggtgaagaagactgaattgagccgacaactagagaaa
ctgcgtgaacggatatccggagcagattaccgcaaaaaagttcccccaacagtacagcaa
caagatgctgacaagatgaaacagtttgagactgagtatcagaaggtggaggaagctctg
agtagttttcagaagatggtgtag
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