Pyxicephalus adspersus (African bullfrog): 140343325
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Entry
140343325 CDS
T11284
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140343325 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pads03041
]
140343325 (DHX16)
Enzymes [BR:
pads01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140343325 (DHX16)
Spliceosome [BR:
pads03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
140343325 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
nSTAND3
GIPC1_GH2
Motif
Other DBs
NCBI-GeneID:
140343325
NCBI-ProteinID:
XP_072286059
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All DBs
Position
Z:complement(12714513..12738936)
Genome browser
AA seq
1036 aa
AA seq
DB search
MDGLESWVRDQLHEVLGMSDRHVAQFLVGTARRSSNSVDFISRLTETGAIDVTDKVRRFA
EDLWLKVPRKAAVERPARAAEREALAMQQKNKSYALLEDSDEEEANDESRDKKRKKKHLR
KRKKEESSDSDGDRAQKEKASPPKVISDDEEDREEMERIKDLEERDAFAERVKKRDKEKT
RNIVERSDKKAYEEAQKRLKVTEEDRKKMVPELRKKSRRDYLVKRERDKLEDLEAEIADD
EYLFAEPELTEVERQELEYKRKVRDLAKEYKKAGEKERMEKHDRYFMPEESRNKKIPDRY
EEPVTEERFAPREEQRRWEEEHIGAAALTFGAKDARARGQKQYDYVLEEDELIQFVSATQ
MKGTVEKEDEDENEKALSELEKKILSIQEVRRSLPVFPYREDLLKAIAEHQILIIEGETG
SGKTTQIPQYLHEEGYTNNGMKIGCTQPRRVAAMSVAARVSQEMSVKLGNEVGYSIRFED
CTSERTVLKYMTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDVLFGLIKDIARFRAD
LKVLVSSATLNTERFSSFFDDAPVFRIPGRRYPVDIYYTKAPEADYLEACVVSVLQIHVT
QPLGDILVFLTGQEEIEACVEMLQERCRRLGSKIAEMQVLPIYAKLPSDMQAKIFEPTPP
GARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARSGMESLIVTPCSKASANQRAGR
AGRVAAGKCFRLYTAWAYKNEMEETTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPP
HETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEKYGCSEQILSIAA
MLSVNNAIFYRPKDKVVHADTARANFTVPGGDHLVLLNVYNQWVETGHSLQWCYENFIQA
RSLRRARDVREQLEGLMGRIEIELTSCEGDNLPIRKAITAGYFYHTARLTRSGYKTVKQQ
QSVFIHPNSSLHEEQPRWVIYHELVFTTKEYMRQIIEIDSQWLLEVAPHYYKSRELEDTA
SKKMPKQIGKSKDELG
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctggagtcctgggtgagagatcagctccatgaagttctaggtatgagcgat
cgccatgtggcccagttcctcgttggcactgctcggcggagttcaaactctgtagatttt
atcagccgtctgacagaaaccggagccatcgatgtcacagataaagtgcgccgctttgcc
gaggatctctggttaaaggtaccccgtaaagctgcagttgaacgcccagctcgagccgca
gaacgagaagccctggccatgcaacagaaaaacaaatcctacgctcttctggaggatagc
gatgaggaagaggcaaacgatgagagcagagataagaagagaaagaagaaacatcttagg
aaaagaaagaaagaagagtcatctgacagcgatggtgaccgtgcacagaaagaaaaagcg
tcacctcctaaggtaatctccgatgatgaagaagacagagaagagatggaacgaataaag
gatctggaggaaagagatgcttttgctgaaagagtaaagaagagagataaagagaaaacc
aggaatattgtggagaggtcagacaagaaggcatatgaagaagcacagaagagactaaag
gtgacagaggaagatcgtaaaaaaatggtacctgagctgaggaagaagtctcggcgggac
tatttggtgaagagagaaagggacaaactggaggacctggaggcagagattgcagatgat
gaatatttgtttgctgagcctgagctgacagaggtggagagacaagagttggaatataaa
cgcaaagtgagggatctggcgaaagagtacaagaaagctggagagaaggagcgcatggaa
aaacatgaccgttactttatgccagaagagtcaaggaataagaaaattccagaccgctat
gaggagccagttacagaagaacgttttgcccctcgagaagaacagaggcgctgggaggag
gagcatattggggcagcagctttgacatttggtgcgaaggatgcccgggcacggggacaa
aagcagtatgactacgtgttggaagaagatgaactgatccagtttgtcagtgcaacacag
atgaaagggactgtggaaaaggaagatgaagatgaaaatgaaaaagcactctcggagcta
gaaaaaaaaatattgtctatccaagaggtgcgccgcagccttcccgtcttcccataccga
gaagatctcctcaaagccatcgctgaacatcaaatccttattattgaaggggagactgga
tctggcaaaacaacccaaatcccacagtatctgcatgaagagggttacactaataatggg
atgaagattggatgcacgcagcctcgaagagtggcagcaatgagtgtagcagctcgagtg
tcacaggagatgtccgttaaactgggaaatgaggttgggtacagtattagatttgaggat
tgcacgtctgagcgcactgtattgaagtatatgactgatgggatgctgctgcgtgaattc
cttacggaaccagacttggcaagttatagcgtaataattatagatgaggcccatgaacga
actctacacacagatgtgttatttggccttattaaggacattgcccggttccgagcggat
ctcaaggtcctagtttccagcgccactctgaacactgaacgtttttcttccttctttgac
gatgcgcctgttttccgaatccctggacgtcgataccctgtggatatctactacaccaag
gccccagaagctgattacttagaggcgtgtgtggtatccgtcctgcagattcacgttaca
cagccacttggagacatattggtgttcttgacaggccaggaagagatcgaggcgtgtgtt
gagatgttacaggaacggtgtcgccgacttggctccaagattgcagagatgcaggtttta
ccgatctacgccaagttaccatctgacatgcaggctaagatcttcgaacccaccccgcct
ggagccagaaaggtcgttgtagctaccaacattgctgagacctctctgactattgatggg
atcatttatgtcatcgatccaggattctgcaagcaaaaaagttacaatgctcggtcagga
atggagtctctcattgtgaccccctgctctaaggcctctgccaatcagagagcaggaaga
gctggtcgtgtggctgcagggaaatgtttccgtttgtatacagcctgggcatataagaat
gagatggaagagacaacggtgccagaaatccagaggactaaccttggcaatgtggtattg
ctgttgaagagtttaggtatcaatgatctcatccactttgacttcatggacccccctcct
catgagactctggttctggccctggaacaactgtatgccttgggagccctcaaccatttg
ggggagctgactaagctgggaagaagaatggccgagctcccggtggatcccatgctgtca
aagatgattctagcttctgagaagtatgggtgctcagagcagattctctccattgccgcc
atgttgtctgtgaacaatgcgattttctataggccaaaagacaaagtggttcatgcagat
acagcacgtgccaatttcactgttcctggaggagatcacctggtgcttctcaatgtgtat
aatcagtgggtggagaccggccattctctgcagtggtgctatgagaacttcatccaggct
cgctccctccgtcgtgctcgggatgtcagagaacagctcgagggattaatgggaaggata
gaaattgagctgacatcatgtgaaggagacaatctacctatccgtaaggctatcacagcc
ggctatttctaccacacggccaggctgactcgcagcgggtacaagactgtgaagcagcag
caatccgtattcatacatccaaacagcagcctgcacgaggaacagccacgttgggttatc
taccatgaacttgtcttcaccaccaaggagtacatgagacagatcatagagattgacagt
caatggctcctagaagtggctccacattactacaagtctagagagctggaggatacggcc
agcaagaagatgccaaaacagatcgggaaaagcaaagatgagctgggctga
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