Pyxicephalus adspersus (African bullfrog): 140344230
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Entry
140344230 CDS
T11284
Symbol
EXOSC5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
140344230 (EXOSC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140344230 (EXOSC5)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
140344230 (EXOSC5)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CUSTOS
GcvP2_C
Motif
Other DBs
NCBI-GeneID:
140344230
NCBI-ProteinID:
XP_072287339
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Position
Z:complement(15633652..15654936)
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AA seq
235 aa
AA seq
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MEVSSESGPPTHGRCIVKRRMEAVERSLRMSGCELGLLSRPDGSANFLQGATSVLAGVYG
PAEIKVSKEMHDKATVEVMVRPKVGLPAIQEKSQEQLIRETCESVINGTLHPRTSITIVL
QIINDDGSLLSCCLNAACMALIDAGIPMRGLFCAVTCALPVEDLLIVDPNLKEQKESRAV
LTIAMESMEKKVLTVSSRGTYSAEEFQQCVGAAWVSASDIFQFYKDSVKRKFSKS
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcagctcggaatcaggccccccgacgcacgggcggtgtattgtaaagcgcagg
atggaagccgtggagcggagtttgcggatgagcggctgtgagctggggctgctgagccgc
ccggatggctccgccaacttcttacagggagcaacgtcagtcctggctggagtctatgga
ccagcagaaattaaagtcagcaaagagatgcatgataaagccactgttgaggtgatggtt
agacccaaggtgggtttacctgcaatacaagagaagagccaggagcaattgatacgagag
acctgcgaatctgtgattaacggcactctgcacccccgaacatcgatcaccatcgtactg
cagattattaatgatgacggctctttactttcctgctgccttaatgcagcctgcatggct
ttgatagatgcagggatcccaatgcgtggcctgttctgcgcggtcacatgtgccctgcct
gttgaggatctgctaatagttgaccccaaccttaaagagcaaaaggagagccgagcggta
ttgaccattgcaatggagagtatggagaagaaagtgttaacagtttcctccagaggcaca
tactcagcagaagagttccagcagtgtgttggagctgcctgggtctcagcctcagacatc
ttccagttctacaaggactctgtgaagaggaaattttccaaatcgtga
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