Pyxicephalus adspersus (African bullfrog): 140344255
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Entry
140344255 CDS
T11284
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03013
Nucleocytoplasmic transport
pads03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140344255 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
140344255 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pads03019
]
140344255 (THOC2)
03041 Spliceosome [BR:
pads03041
]
140344255 (THOC2)
Messenger RNA biogenesis [BR:
pads03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140344255 (THOC2)
Spliceosome [BR:
pads03041
]
Complex C
Other components
EJC/TREX
140344255 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140344255 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
140344255
NCBI-ProteinID:
XP_072287393
LinkDB
All DBs
Position
Z:39889917..39973442
Genome browser
AA seq
1590 aa
AA seq
DB search
MAAVVLPADWIKNWEKSGKNDFIQLCRSLSEKGQENVTFKETQQVIYELACQVVKGNLKQ
DQAAGVFTDIIDLREDMPSILADVFCILDIETSCFEEKWRRDHFTQLVSSCLYLVSDTIL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDM
SGSITSDLILENIKSLIGCFNLDPNRVLDIILEVFECRPDQDEFFVPLIESYMGMCEPQT
LCHILGFKFKFYQEPNGETPSSLYRVAAVLLQQNLIDLEDLYVHLLPLDNSILDEHKREV
IEAKQIVRKLTLVVLSSEKNEEKEKEKDKDDEKTDKTTDNQKLGLLEALLKIGDWQHAQN
IMDQMPPFYATSHKSIAIALCSLIHITIEPLYRRVGVPKGAKGTRVSPLQSQKAPKPVEY
FEDLRRDVFNMLCFLGPHLSHDPILLAKIVRLGKALMKEFQSDASRAEDKEKMEILFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMIKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASFCGAIFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEITMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVVFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITSCEVVMAPVHEAVISLHPSKVWDDISPQFYATFWSLTMYDLAVPSSSYNREI
NKLKIQMKAIDDNLEMPPNKKKKEKERCTALQDKLVEEERKQSEHVSRVLQRMKLEKDTW
LLARSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHLQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCSMLETVTKWHSDRAVYDKDCGSYPGFVTILRASNFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEFTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLNALAMGYSGQLKNRKPFMVPENEFHHKDPPARSVIPSPVQN
GPGTVNQSASVMVNATKPEESTAEDAEKIKEKSQSATKVVTKAASATPKVTTNNGNSSSN
SKVTKEKEDKDKSGKEKEKDKKEKTPSTPQETKAPGKDGKDKIKEDRANKDEKLKDVKEK
TPKSDKEKEKLKKEEKSQKEEKSKAATTGTEAKLAAEKEKEKEPSRERDMLKESKTKESS
KGGDKTAVAGSLKSPVPRSDTSETEREQKRRKIDMHSSPSHSSAVKENLSEFKDSSAKHY
INHTTQPTSKSKEKEVDKKEIDKTRERSREREKKEEKERKERKRDHSNSDREVNQDSKRR
KEENGTSGSSKHSKSESPSDSPRSNEKDRNKSKSSNKDKGELMKDKVEKSSSSSKKESRH
DKEKSEKKEKRESTGGKEEKKHHKSSDKHR
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtcgtattacctgctgattggataaagaattgggaaaaatccggaaaaaac
gatttcatacagttgtgtcgcagcctcagtgaaaaagggcaggaaaatgtgaccttcaaa
gaaacccagcaagttatttatgagcttgcttgccaagttgttaaaggaaatctgaagcag
gatcaagctgctggagttttcacagatatcatagatttacgagaagacatgccttcaata
ttggcagacgtattttgtattttagatatcgaaacaagctgttttgaagaaaaatggcgg
cgggatcattttactcagctggtatcatcatgtttgtatctagtgtctgacaccattctt
aaggagcgcttagatcctgaaacactggaatcccttggactaattaaacaatcccaacag
ttcaaccagaagtctgtaaaaattaagacaaaacttttttacaagcaacagaaattcaat
ttattgagagaagaaaatgaaggatatgcaaagttgattgctgagcttggacaggatatg
tctgggagtataacaagcgatttaattctagaaaatatcaaatccctaattggatgtttt
aaccttgatccaaatagagtattggatataatcttagaagtatttgaatgccgaccagat
caagatgagttttttgtcccgttaattgaatcctacatgggtatgtgtgagcctcagacg
ttgtgtcacatccttggatttaaatttaagttttaccaggaacccaatggagaaacccca
tcatctttgtacagagttgctgcagttctcttacagcaaaaccttattgatttggaagac
ctttatgtacatcttctgccattggataacagcatactcgatgaacacaaaagggaggtt
atagaagctaaacagattgtcagaaaactaactttagtagttctctcttctgaaaaaaat
gaagaaaaggaaaaagaaaaagacaaggatgatgaaaagacagataagactaccgacaac
cagaagcttggtttacttgaagcgctactgaagattggggactggcagcatgctcaaaat
ataatggatcagatgcctcctttttatgccacctcccataaatcgattgcaatagcactg
tgcagccttattcatataactattgagccgctctatagaagggtgggagtaccaaaaggt
gcaaaggggactcgggtttcacccttgcaaagccagaaagccccaaaaccagtggaatac
tttgaagatttaagaagggatgtattcaacatgctctgtttccttggtccacatctatca
catgatccgattttgctggcaaaaattgttcgacttggcaaagctttaatgaaggagttt
caatctgatgcaagccgagcagaagataaagaaaaaatggagattttattcagttgcctg
ctaagcattacagatcaggttttacttccttcattgtcattaatggactgtaatgcatgc
atgtctgaagaactttggggcatgatcaaaacatttccataccagtacaggtatcgtctg
tatgggcaatggaagaatgaaacttacaacagtcatccattactggtcaaagttaaagca
caaacaattgatcgtgccaaatatattatgaagcgtctaactaaagaaaacgtgaagcca
tcaggacggcaaataggaaaactaagccatagcaatccaaccattttatttgactatatt
ctttcacaaatacagaagtatgacaatttaataacacctgttgtggattcattgaaatac
ctcacgtccctgaactatgatgttcttgcatactgtataattgaagctcttgcaaatcca
gaaaaagaaaaaatgaagcatgatgacaccacaatctccagctggttacagagcctcgct
agcttttgtggagcaatttttaggaaatatcctattgaactagctgggcttctgcagtat
gtagccaaccaactgaaagctggcaaaagttttgatttactgattctgaaagaggtggta
caaaagatggctggtattgaaattactgaggaaattacaatggaacagctggaagcaatg
actggtggagaacaacttaaagcggaggggggttactttggtcaaatcagaaacaccaag
aagtcttctcaaaggttaaaagatgctttactggaccatgacttggccctacctctgtgt
ctgctgatggcgcagcagagaaatggtgtggtatttcaagaaggaggagaaaagcatttg
aagttggtgggaaagttgtatgatcagtgccatgatactttggtacagtttggggggttt
ttggcatctaatcttagtacagaagattacataaaacgtgttccatcaatagatgtcttg
tgcaatgaatttcacaccccacatgatgctgcatttttcctgtcgcggccaatgtatgct
catcacatctcgtcaaagtatgatgagttaaagaaggcagagaaaggaaacaaacagcaa
cataaagtacacaaatatattacgtcatgcgaggttgtgatggctcctgttcatgaagct
gtgatttctttacatccttcgaaagtatgggatgatatcagccctcagttttatgccact
ttctggtccctgacaatgtatgacctggctgttccatcctcaagctacaacagagaaatc
aataaattgaaaatacaaatgaaagccattgatgacaatcttgaaatgcctccaaataaa
aagaagaaggaaaaggaaagatgcactgctctgcaagataagctagtggaggaagagagg
aagcagtcagaacatgtaagcagagttctgcaaaggatgaaactggaaaaagacacctgg
ctcttagcccgatccacaaagaatgaaaccatcaccaaatttttacagctttgtatattt
cctcgatgtatattctcagcaattgatgcagtttactgtgctcgctttgtggagcttgta
cacctgcagaaaactcccaatttttctactctcctgtgttatgatagggttttttcagac
ataatttacacagtggccagttgcactgaaaatgaagcaagtcgctatgggagattcctg
tgctctatgctggagactgttactaagtggcacagtgaccgagcagtatatgacaaggat
tgtggaagctatccaggatttgtgacaatattaagggcatccaattttgatggtggtaac
aaggctgaccagctggattacgagaatttccgtcatgtggttcacaaatggcattataaa
ttaacaaaggcatcagttcattgtcttgagactggagagttcactcacatcaggaatatt
cttattgtgctcactaaaattttaccatggtatccgaaagttttaaatctaggacaagct
ctggagcgcagagttcacaaaatctgtcaagaggagaaggagaaaagacctgatctaaat
gcattggccatgggctactctggacagttgaaaaacaggaaacctttcatggtacctgaa
aatgaatttcaccacaaagatcctcctgccaggagtgtcattccatctccagtacagaat
ggtcctgggacagtcaatcagtcagcatcagtcatggtaaacgcaactaagcctgaagaa
agcactgctgaggatgctgaaaaaataaaggagaaatctcagagtgctacaaaagttgtt
accaaggctgctagtgcaacaccaaaagttactacaaacaatggaaacagttcctcaaat
agcaaagttactaaagaaaaagaagacaaagataaatctggtaaagaaaaggagaaagac
aagaaggagaagactccatctaccccgcaagagaccaaggcacccggaaaggatggcaaa
gataaaataaaggaagatcgggcaaataaagatgaaaagctgaaagatgttaaggaaaag
acaccaaaatctgacaaagaaaaagagaaactcaagaaagaagaaaaatctcagaaagaa
gaaaaatctaaagctgctacaactggtactgaggcaaaactggctgcagagaaggagaaa
gagaaggagccctctagagaacgagatatgttgaaggagtctaaaacaaaggaaagctct
aaaggtggagataagacagccgtagctggctcattgaagtcacctgttcccagatctgac
acatcggagactgagagggaacaaaaacgacgcaaaattgatatgcattcttctccgtca
cattcctcagcagtaaaggagaacctcagtgaatttaaggactcttcagcaaagcactac
ataaaccacactacacaaccaacatccaagagcaaagagaaggaggtagataagaaagag
attgacaaaacaagagagaggtctcgggaaagggaaaaaaaggaagaaaaagaaagaaaa
gaaaggaaaagggatcattctaacagtgaccgtgaagtgaaccaagactcaaagagacgc
aaagaagaaaatggaacaagtggctcgtcgaaacatagtaaaagtgagagtccctcagat
tccccacgctcaaatgaaaaagaccgaaacaaatctaaatcttcaaataaagacaaaggg
gagctcatgaaagataaggtagaaaaaagctcttccagcagcaagaaggaatctagacat
gacaaggaaaaatccgaaaagaaggaaaaacgtgagagcactgggggaaaggaggaaaaa
aaacatcataaatcttctgacaagcacagataa
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integrated database retrieval system
