Pyxicephalus adspersus (African bullfrog): 140344259
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Entry
140344259 CDS
T11284
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
KO
K14966
host cell factor 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03083
Polycomb repressive complex
pads04980
Cobalamin transport and metabolism
pads05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
140344259 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
140344259 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140344259 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pads01009
]
140344259 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pads03036
]
140344259 (HCFC1)
03029 Mitochondrial biogenesis [BR:
pads03029
]
140344259 (HCFC1)
Protein phosphatases and associated proteins [BR:
pads01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140344259 (HCFC1)
Chromosome and associated proteins [BR:
pads03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
140344259 (HCFC1)
HMT complexes
COMPASS/SET1 complex
140344259 (HCFC1)
MLL-HCF complex
140344259 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
140344259 (HCFC1)
Mitochondrial biogenesis [BR:
pads03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
140344259 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
140344259
NCBI-ProteinID:
XP_072287402
LinkDB
All DBs
Position
Z:complement(79502084..79528474)
Genome browser
AA seq
2152 aa
AA seq
DB search
MASSPAVTGSGALQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELHVY
NTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKR
LKAKAPKNGPPPCPRLGHSFSLVGSKCYLFGGLANDSEDPKNNIPRYLNDLYILELRPGS
GVLAWDIPITYGILPPPRESHTAVVYTDKEAKKSRLVIYGGMSGCRLGDLWILDIDSLTW
SKPSLNGLAPLPRSLHSATTISNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLD
SMSWEHIVMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLETE
KPPSPARVQLVRANTNSLEVSWGAVSTADSYLLQLQKYDIPAAAAAMSPANPVPSVPVNP
PKSPAPAAAAPAIQSVAHTGITLIPQAASVPSTTATIQVLPTIPGNPIAVSAAPRPQTVP
AVLKVQAPQSTVSTPLVTVRPATQVGKAPVTVTSLPPGVRMVVPAQSTQGTAIGSSQPMS
GMAALAAAAAATQKIPPSSAPTVLSMPAGTTMVKSVAMSSASTLPTSVKMASTPIMVSNP
ATRMLKTAAAQVGTSVSSAANTTSRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVK
SPISVPGGGTLLSNIGKMVSVVQTKPVQTSAITGQASSGPLTQIIQTKGPLPAGTILKLV
TSADGKPTTIITTSQAGGTGTKPTILGISSVSPNTTKPGTTTIIKTIPMSAIITQAGATA
GVTSSAGIKSPITIFTTKMVTSGTGTPAKIITAVPKLTTSHGQQGLTQVVLKGAPGQPGT
ILRTVPMGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGVHNTAS
LATPINTLGTIATLSSQVINPGAITMSAAQTSLTAASGLTTPTITMQPISQPTQVTLITT
PSGVEAQPVHDLPVSILASPTTDQPTATVTIADSGQGDQPPGTVTLVCSNPPCETHETGT
TNTATTTLVNLVQQPGGTLQFVCEGQEPGTFVATALGQANGSVVRVCSNPPCETHETGTT
QTSTTAMANIGQSGSVTRVCSNPPCETHETGTTHTSTTAMSNISSEQPGTVVRVCSNPPC
ETHDTGTTQTSTTATSNIGSEQMGNVRVCSNPPCETHDTGTTPTCTTARGNLANEQHDNL
QRPLNPPCETLQTISTHTVMTVPASITSGQSEKVQQFCSNPPCETHETSTTNTPSVATSD
LTTEQPGNAVQMCSNPPSETHETGTTHTPTTARQKNAPCETHQTISTKTTMSVHPEFSSG
SSGLLEVENASGSSKETEAPAPVQSQAVCSKSPCETGTTQTATTAKSNINSGTSENGQRS
AGDSCETHQASSTRTTMTVSEVNQVVKTLCSNPPCETHETGTTNTATTTSSNIGGQQGES
SEQSSVEADQNSTTSTVSAPNTLEQRVCSNPPCETHETNTTNTATTSTSNFGNVPAQQVC
SNPPCETHETGTTHTATTVTASMGDNQEPPPAANGQGEQETAPTEEAASGSNTGAVAAAS
PVTIVAVAASSSSPVHTVQPVVSRAVTTVTHSMQLPGPSVPNISSLTEPAPEDAVQSSEA
IPCNEQAEAPLSSDLLQPTEDVNAEAEAHAMESSVPEHTEAQLHAAMETDQGQEAGAAEQ
QGVEQLSLPQELMAEGQTTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQA
AQQAVMAAAGEPMDTSDMAHAELRHLTSEGPTTTIPIVLTQQELAALVQQQQQLQEAQHQ
QQLQQLQQQQLQQQQQLQQQQLQQLQQLQQLHHVPTEALAPADSLNDPASESNGLNELTS
AVTSSVALLPSTATDSLAPTNTFTAAQPVVIASSAKLQAAAALTEVANGIESKQDSLPQQ
PKTQLKKENQWFDVGVIKATNMMVTHYYLPADDSTNDDDSGVLPDYSQLKKQELQPGTAY
KFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIE
YSVYLAIQSSQGSEQKATTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRI
AARNEKGYGPATQVRWLQESNKDGSAAKPGSKRPVSSPDMKSVPKKAKPDHP
NT seq
6459 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcaccggcagtgaccggctcaggagctttgcaaccccgttggaaacgagtg
gtcggctggtcgggcccagtgcctaggccccggcatggacaccgggcagtggctattaag
gaactgatcgtggtgtttggtggaggaaacgaagggatcgtggatgaacttcatgtctat
aacaccgctacaaaccagtggttcattccagcagtcagaggagacatcccgccaggatgt
gccgcctatgggtttgtgtgcgatgggacaaggctacttgtctttggaggaatggtagaa
tatggcaaatacagcaatgacctctatgagctacaggctagcagatgggaatggaagaga
ttgaaagccaaagcaccaaaaaatggtccacctccatgtccccgactgggacatagcttt
tcattggttggaagcaaatgctacctgtttggcgggttggctaatgacagcgaggaccca
aagaacaatattcccagataccttaatgatctttacatcttggagttgcgtcctggttct
ggagtcctagcctgggacatacccataacttatggtatattgcctccaccccgagagtcc
cacaccgcagtggtctacacagataaagaagccaagaagtctcgcctggtgatatatggt
ggtatgagtggatgccgacttggcgatctctggattttagatatagactcactcacctgg
agtaagcctagtctgaatggtcttgcaccgcttccccgaagtcttcattctgccacaacc
ataagcaacaaaatgtatgtctttggaggctgggtgcctttggttatggatgatgttaaa
gtagcaacccacgagaaagagtggaaatgcacaaacaccctggcgtgtcttaaccttgac
tccatgtcatgggaacatattgtaatggataccctggaagataacattccacgggctcgt
gctggccactgtgctgtggcaatcaatacacgattgtacatatggagtggacgtgatggc
taccgtaaagcctggaacaaccaagtgtgctgcaaggatctgtggtacctagaaacagaa
aaaccgccctcgcctgcaagagttcagctagtcagggcaaataccaattctctggaggtg
agctggggagccgtgtcaactgcagacagttacttgttgcagcttcagaagtatgatata
cctgctgcggctgcagccatgtcgccagccaatcctgttccgtctgtgccagtgaatccg
cccaagagcccagctcccgcagcagcagctcctgcaatccaatctgtggcccacacaggc
atcaccctgattccacaggctgcttctgtaccttcgacaacagccactatacaggtcttg
cctacgatccctgggaatccaattgcagtttctgctgctcctcgtcctcagactgtccca
gctgtcctgaaagttcaagcacctcagtccacagtgagcacgccacttgttactgttcgc
ccagctacacaagttggaaaagctccagtaactgttacctctctccctcctggtgtgcgc
atggtagtgcctgcccaaagcactcaaggcactgctattggcagcagtcagccaatgagt
ggcatggctgctcttgctgcagctgctgctgctacacagaagatccctccttcatctgca
cccacagtactgagtatgccagctggaaccaccatggtgaaatctgttgcaatgtcatct
gctagcactcttcctacatctgtgaaaatggcatccactccaataatggtcagtaaccca
gccacacggatgctgaaaactgcagcagcacaagtggggacttcagtgtcttctgctgcc
aacacaacttctcgtcctattataactgttcataaatctggaacagtcacagttgcccag
caagcccaggttgtaaccacagtagttggaggtgtcacaaagaccatcaccttagtgaaa
agtcccatatctgttcctggtggtggcaccttgctttccaatattggtaaaatggtgtct
gttgtccagaccaagccagtgcagacatctgcaataacaggacaggcttctagcggaccc
ttaacacagatcatacagacaaagggacctcttcctgctggaactatattaaagttggtg
acctcagcagatggtaaacccacaactataatcaccacctctcaggctggaggcaccgga
acaaagcctaccattttgggtataagcagtgtgtctccaaatactaccaagccgggaacc
accaccattatcaaaactatccctatgtctgccatcatcactcaagcaggagctacagca
ggtgttactagctccgcagggattaagtcaccaattacgatcttcacgactaaaatggta
acttcaggcacaggaacaccagccaaaataataactgcagttcccaagcttacaacaagc
cacggacagcagggtttaacccaggtggtgttaaagggtgctccagggcagcctggtaca
attctcagaactgttcccatgggtggtgtaagactagtcactcctgtgactgtttcttca
gttaaaccaacagtaactactctcgtggttaaagggaccacaggagtgaccactcttggt
actgtcactggaacagtttccacaagtcttgcaggagctggtgtgcacaacactgcctca
ctagcgacgccaattaatactttgggtaccatcgctaccctgtccagtcaagtgatcaat
cctggcgccattaccatgtctgccgcacagacctccctgacggctgcttcaggactgact
actcccactattactatgcagccaatatcgcagcccacccaagtgacattaatcacaact
cctagtggtgttgaagctcagcctgtccatgacctacctgtctccattttggcttcacca
actacagatcaacctacagcaaccgtaactatagcagattctggccaaggagatcagcct
ccgggcacagtaacacttgtatgttccaatcctccttgtgaaactcatgagacaggaacc
accaatactgccaccaccacccttgtgaatcttgtacagcagcctggaggtacacttcag
tttgtgtgtgaaggccaagaacctggaacctttgtagccacagctttgggccaagcaaat
ggaagtgtggtcagagtttgctctaatcctccatgtgaaacacatgagactggaaccaca
caaacttcaacaactgcaatggcaaatattggtcagagtggttcagtaacaagagtttgc
tccaaccctccctgtgagacacacgaaactggaaccacacatacatcaaccacagctatg
tcaaatattagcagtgagcagccaggcacagtagtaagagtatgttcaaaccctccttgt
gaaacccatgatactggaaccactcagacatctaccactgcaacatcaaatattggtagt
gagcaaatgggaaatgttagagtgtgttctaatccaccatgtgagacccatgataccggc
acgaccccaacttgtacaacagccagaggaaaccttgccaatgagcaacatgataacttg
caaaggccgctaaatcctccatgtgaaaccttacaaaccatatccacccatacagttatg
actgtgcctgctagcattaccagtgggcagtctgagaaggtacaacaattttgcagtaat
ccaccttgtgaaacacatgaaacttcgacaaccaatacgcccagtgtggcaacctcagat
ctgacaactgaacagcctggcaatgccgtgcagatgtgctctaatcctccatccgaaacc
catgaaactggcactacccacacgccaaccactgcaagacaaaaaaatgcaccttgtgaa
actcatcaaaccatatcaacaaaaactactatgtctgtacatccagagttcagctctggt
tcatcaggccttttagaggtagaaaatgcctctggaagtagcaaagaaacggaagcacct
gcccctgtacaatcgcaggcagtatgctcgaaatctccttgtgaaactggcactacccaa
acagcaaccacagccaagtccaatataaactccggtacatctgagaatggccagagatct
gcaggagactcttgtgagacccatcaagcaagttccactcgtaccaccatgactgtttca
gaagtcaatcaggttgtaaaaacattgtgttctaacccaccgtgtgagactcatgagact
ggtacaacaaacacagcaacaacaacaagttccaatattggagggcagcagggtgaaagt
tccgagcagtcctctgttgaagctgaccagaattccacaacatccacagtatctgcaccc
aacactttagaacagcgtgtgtgttcaaacccaccttgcgaaacacatgagactaatact
accaatacagcaaccacatctacatctaactttggaaatgttcctgcacaacaagtttgt
tcaaacccaccttgtgaaacacatgaaacaggaactacccacacagcaaccactgtcaca
gccagcatgggggataatcaagaaccaccaccagctgcaaacggccaaggagagcaagaa
actgctcccacagaggaagctgcctcaggcagcaataccggtgctgtagctgctgcatcc
ccagtgactattgtagctgttgcagcttcgtcgtcttctccggtacatacagtgcagcct
gttgtttctagggcagttactactgtgactcattctatgcagctccctggaccttctgtt
ccaaatatttcatctttgactgaaccagcacctgaggatgctgttcaaagttcagaggcc
atcccttgcaatgaacaagctgaagctccgctatcctctgatttactccagcctactgaa
gatgttaatgcagaggcagaagcgcacgctatggagtcttcagtgccagaacatactgaa
gcacagctacatgcagcgatggaaacagaccaaggtcaggaggcaggtgctgctgagcag
caaggagttgaacagctttcacttccacaagaactcatggcagagggtcagacaacaacc
ttaatggtcacaggcctaacacctgaggaattggcggtaactgctgcagctgaggcagct
gcacaagctgctgccacagaagaagcccaggcattggctattcaagctgttttacaagct
gcacaacaggcagtgatggcagcagctggagagccaatggatacctcagatatggctcat
gctgagcttcgtcaccttacatctgaaggtcctactaccacaattccaatagtgcttacc
caacaagaactggccgctctggttcaacagcagcagcaactacaggaagcacaacatcag
caacagttacaacaacttcagcagcagcaattgcagcaacagcagcagcttcagcaacag
cagttacaacaacttcaacagctgcaacaactccaccacgtgcctacagaagcccttgca
ccagctgacagcctcaacgatcctgccagtgaaagcaatggactcaatgaattgacgagt
gcagtgacaagttcagtggcacttttaccgtctacagccacagatagtttggctccaaca
aataccttcacagcagctcagccagtggtaatagccagttcagctaaattacaagcagca
gcagcccttacagaagtagcaaatggcattgaatcgaaacaggattcactccctcagcag
cccaagactcaactgaagaaagagaatcaatggtttgatgttggtgtaataaaggctaca
aatatgatggtgacacattactacttgcctgcagatgactccaccaatgatgatgactct
ggtgttttaccagattacagtcaattaaagaaacaggagctacagccaggcactgcatac
aagttccgcgtagcaggcataaatgcttgtggtcgtggacccttcagtgaaatctctgcc
ttcaagacctgtttacctggtttcccaggtgcaccatgtgccataaagatcagtaagagt
cctgatggtgctcaccttacatgggaacctccttcagttacatctggaaagatcatagaa
tattctgtctacttggctattcaaagcagccagggtagcgaacaaaaagctacaacacct
gctcagctggctttcatgcgggtatactgtggccctaatccatcttgtctggtacagtcc
tccagcctgtccaacgcccacatagactataccacaaaacccgcaatcatcttccggatt
gctgcacgtaatgagaagggttacggacctgccacacaagtcaggtggttgcaagaatcc
aacaaagatggttcagctgccaaacctggaagtaaacgcccagtatcttcaccagacatg
aaatctgttccaaagaaggcaaaacctgaccacccatga
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integrated database retrieval system
