Pyxicephalus adspersus (African bullfrog): 140344306
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Entry
140344306 CDS
T11284
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
pads Pyxicephalus adspersus (African bullfrog)
Pathway
pads03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pads00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
140344306
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pads01009
]
140344306
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pads04515
]
140344306
Protein phosphatases and associated proteins [BR:
pads01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
140344306
Cell adhesion molecules [BR:
pads04515
]
Cadherins
Protocadherins
140344306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
RibLong
K319L-like_PKD
RET_CLD1
TMEM154
Big_9
Y_Y_Y
He_PIG
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
140344306
NCBI-ProteinID:
XP_072287480
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All DBs
Position
Z:2881270..3629517
Genome browser
AA seq
1225 aa
AA seq
DB search
MDLLSAIYLLAVLIACIVYESGAQEKNYIIREEQGENISIGNLLRDLNLTLDPDIALSTP
LQFKLVYKTGDVPLVRVEENTGEIFTTSNRIDREKLCAGIFTENKCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAVNSRYSVPSAIDPDVGKNGIQNYDLLK
GQNVFGLDVIETPEGDKWPQLIVQQSLDREQRDTYVMKIKVEDGGNPPRSSTAILQVTVT
DVNDNLPVFKDKDIEVNIPEDAPVGTSVTQLHATDADLGSNAKIHFSFGNQISNLAKRHF
AIDNNTGLITVKEPLDREEAHYHKLTVLASDGSSTPSRATVTINITDINDNIPSIDTRYI
INPVNGTVQISEKAPINTKIALITVTDKDADLNGKVTCFTDHDVPFRLKPVFDNQFLLET
AAPLDFETTREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNPPIFTLPVIGLSFVENNP
PGTELTKISATDADSGRNAELSYMLAPNAPSIFNLDRRTGILTAVRKLDREKQDRYTFTV
IAKDNGVPSLQTNTTVTLSVLDQNDNSPSFTHNEYNFYVPENLPTYGTVGLITVTDEDMG
ENAEFTLSLVNARDNFIIDPHTGVIKPNITFDREQQGSYTFQVKAVDRGTPQKSSTVKVT
IFVEDVNDNKPVFVMPSTNYSYELVPTSANPGSLVTRVFAVDNDTGVNADLRYSIVGGNP
RGLFTIDERSGNISLKEKILAIDHGLHRLVIKVNDSGKPEPFHAIALVHLFVNETVTNGS
YVQELVRRNMETPVGQTFGEGDITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKNKQTGEWVSPNQENRQIKKKKKKKKRSPKNLLLNFVTIEETKTEDPAHEHING
TLDIPVELEEQTMGKYNWGTTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGPIHTRQHGKETGKLQSP
LKESTLENWIQPPVQRRVTFHLPDGSQESCSDSGLGDQEPSGSSNASQPLPLGFGQEEYY
EQTSTNSRTEGDGNSDPESTIEVNLQKALAEASETCTQECLILGHSDNCWMPPSLTQYQQ
SNPPLPTFGIQQGWGRGRLDGVHTLGRPLPKDDIDKGVSRPQFYNTCERHCSIDDPVKVI
PLANFTPGSAPSSGSNSIFVHEHQL
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctatcagcgatttaccttttggccgtgttaatagcctgtatcgtctatgag
tctggagctcaggagaagaattatatcatacgtgaagaacagggtgaaaatatatccatt
ggaaacttgttacgggacctaaacttaacgcttgaccctgatatagctctctctacccct
cttcagtttaagttggtctacaagaccggtgatgtccccctggtacgggttgaggagaac
accggtgaaattttcaccacctccaaccggatagaccgtgagaagctttgcgctgggatc
tttacagaaaacaagtgcttttatgaggtggaagtggccgttttacccgatgaggtcttc
aggttggtcaaaatcaggttcttgattgaagacatcaacgataacgctccacttttccct
tccacggtcattaatatctccatccctgaaaacactgctgttaactcccgatactctgtg
ccatcggccatcgatccagatgtgggcaagaatggaattcagaactacgacctacttaag
gggcagaatgtgtttggacttgatgtcatcgaaactcctgaaggtgacaagtggccacag
cttattgtccagcagagtttggatagagagcagagggatacttatgtcatgaagattaaa
gtggaagatgggggaaatccacccagatcaagcactgccatcttacaagtgacagtcact
gatgttaatgacaatctgcccgtcttcaaagacaaagacattgaagtaaacattccagag
gatgccccagtgggaacatctgtcacacagcttcatgcaacggatgccgatttgggctcc
aatgccaaaattcatttttcttttggcaaccaaatatccaatcttgccaaacggcatttt
gctatcgataacaacactggattaataacggtaaaagagccgctggaccgcgaggaagcg
cattatcacaagctaaccgttttggccagcgatggcagttcaacaccttcaagagccaca
gtcaccatcaacatcaccgacattaatgataacatcccatcaattgatacaaggtatata
ataaatcctgtaaatggcactgtacaaatatcagagaaagctccaataaatacaaaaata
gctttgattaccgttacagacaaggatgccgatcttaatggcaaagtgacctgtttcacc
gaccatgatgtcccatttaggttaaagccagtgtttgacaatcagttcttgctggagacc
gcagctcctttggattttgagacaacaagggaatatgccatcaagattgttgcttctgat
tctggaaagccaccattaaaccaatctgcaatgctacttattaagataaaggatgaaaat
gacaatcctccaatttttacgctccctgtgatcggtctgtcttttgttgaaaacaaccct
ccaggaactgagcttaccaagataagtgctactgatgccgatagcggccggaacgcagag
ctgagttacatgttggctcccaatgctccatctatctttaaccttgacagaaggacaggg
attcttacagcagtcaggaagctagatagggaaaaacaagaccgatatacatttaccgtc
atcgccaaggataatggagtaccgtccttacagactaacaccacggtgaccttatcagta
cttgaccaaaacgataacagcccatcattcacccataacgaatacaacttctatgttcca
gagaatctgcccacttatggaacagttggtcttatcacggtaacagatgaagatatgggg
gagaatgctgagtttacgttgtcacttgtcaatgccagggataactttataatcgacccc
cacacgggtgtcatcaaaccaaacattacgttcgacagggagcagcaaggttcgtacact
tttcaagtgaaagcagtcgacaggggtactccacaaaaatcctcaacagtcaaagtgacc
atatttgtggaggacgtcaatgataataaaccagtgttcgtcatgccatccaccaactat
tcatatgagttagtgccaacgtcagccaatcctggatctttggttactcgggtttttgct
gttgataatgacactggggtgaatgctgatctacgttatagtatagttggtgggaaccca
aggggtttgtttacaatcgatgaaaggagtggcaacatcagcttgaaagagaaaattctt
gccattgaccatggcttacaccggcttgttattaaagtcaatgattcaggaaaaccagaa
ccttttcatgccatagctttggttcacctatttgtcaatgaaacagttaccaatggatct
tacgtgcaagagcttgtgcggagaaacatggaaacgccagtagggcagactttcggggaa
ggagatataacgccacaaaccaatgactatgtcaagatcatcattgccatcattgcaggc
acgatgacagtaatcctggtcatttttgtcactgctttggttcgctgccgccaaacccca
aggcacaaagtggtccagaaaaacaaacaaactggtgaatgggtctccccgaaccaagaa
aaccgtcagatcaagaaaaagaagaagaagaagaagcgctctccaaaaaaccttctccta
aattttgttaccatagaagagactaaaacagaggatcctgcccatgaacacatcaatggc
accttggacatcccggtggagttagaagaacagactatgggaaaatacaattggggcacc
actccaaccaccttcaagccagatagcccagatttggccaagcactacaaatctgcttct
ccgcagccaaccttccagattaagcccgagactccggttcctccgaaaaaacaccatgtc
atccaggagctgcctcttgacaacacatttgtggtgggttgtgactcgttatctaagtgc
tcctccagtagctcggatccgtacagtgtctcggaatgcagctgtcaaggaggctttaaa
gctcccggaccaatccacacacgacagcatggaaaagaaaccggaaaacttcagtcgcct
ctgaaagaatcgaccctagagaactggattcaaccaccggtccagcgccgtgtcacgttt
cacctcccggatggctcccaggaaagttgcagtgacagtggattaggagaccaggaaccc
agtggaagctccaatgcttcgcagccgttgccccttggctttgggcaggaggaatactac
gagcaaacttctactaacagcaggacagaaggcgatgggaactccgacccagagtccacc
attgaagtgaaccttcagaaagctttggcagaagcatcggagacctgcacccaggagtgc
ctcatcttaggtcactccgacaactgctggatgccgccgtcgctgacccagtaccaacag
tccaacccgcctttgccaactttcggtattcagcaaggatggggaagaggaaggctggat
ggagtgcacacccttggaaggcctctgcccaaggatgacattgacaagggggtttcaaga
ccccagttttacaatacttgcgagagacactgttccattgacgatcccgtcaaagtgatt
cccttggcaaatttcacgccaggctcagcgcccagttcaggaagtaattctatcttcgta
catgagcaccagctctga
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