Pseudomonas aeruginosa PAO1: PA0455
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Entry
PA0455 CDS
T00035
Symbol
dbpA
Name
(RefSeq) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pae
Pseudomonas aeruginosa PAO1
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pae03009
]
PA0455 (dbpA)
Enzymes [BR:
pae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PA0455 (dbpA)
Ribosome biogenesis [BR:
pae03009
]
Prokaryotic type
rRNA helicases
PA0455 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
881459
NCBI-ProteinID:
NP_249146
UniProt:
Q9I663
LinkDB
All DBs
Position
complement(513051..514427)
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AA seq
458 aa
AA seq
DB search
MTSTAFSSLPLSADLLANLDSLGYREMTPIQAQSLPLILQGHDLIAQAKTGSGKTAAFGL
ALLSPLNPRYFGCQALVLCPTRELADQVAKEIRRLARAADNIKVLTLCGGVPYGPQVASL
EHGAHVVVGTPGRIQEHLRKGTLVLDGLNTLVLDEADRMLDMGFYDSIAEIIGQLPERRQ
TLLFSATYPDGIEKLAKTFMRDPRQVRVESLHADSQIEQRFFEIDPKQRMDAVVRLLQHF
RPQSCVAFCQTRQQCQELADALKAQRISALALHGDLEQRERDQVLTVFANRSCNVLVATD
VAARGLDIAALETVINVELARDPEVHIHRIGRSGRAGEKGLALSLVAPAEASRAQAIEDL
QKQPLAWYALGQLKASPEPLLPPMSTLCIAGGRKDKVRPGDLLGALTGDAGLPGSAVGKI
AIFDFQAFVAIERGLAHQALKRLSEGKIKGRSFKVRLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgacctccaccgctttctcctcgctgccgctttccgcggacctcctggccaatctcgac
tccctcggttaccgggagatgacgccgatccaggcgcagagcctgccgctgatcctccag
ggccacgacctgatcgcccaggccaagaccggcagcggcaagaccgcggccttcggcctc
gccctgctcagcccgctgaacccgcgctacttcggctgccaggcgctggtgctgtgcccg
acccgcgaactggccgaccaggtcgccaaggagatccgccggctggcccgcgccgccgac
aacatcaaggtcctgaccctctgcggcggcgtcccctacggcccgcaggtggcttcgctg
gagcacggcgcgcacgtggtggtcggcaccccggggcgcatccaggagcacctgcgcaag
ggcaccctggtcctcgacgggctcaataccctggtcctcgacgaagccgaccggatgctc
gacatgggcttctacgacagcatcgccgagatcatcggccagctccccgagcgccggcag
accctgctgttctccgccacctacccggacggcatcgagaagctggcgaagaccttcatg
cgcgatccgcgacaggtgagggtcgagtcgctgcacgccgacagccagatcgagcagcgc
ttcttcgagatcgatccgaaacagcgcatggacgccgtggtacgcctgctccagcatttc
cggccacagtcctgcgtggccttctgccagacccgccagcagtgccaggagctggccgac
gcactgaaggcgcagcggatttccgccctggccctgcacggcgacctggagcagcgcgag
cgcgaccaggtcctgacggtgttcgccaaccgcagttgcaacgtactggtggccaccgac
gtggccgcccgcgggctggacatcgccgccctggaaacggtgatcaacgtcgagctggcg
cgtgacccggaggtccacatccatcgcatcggacgcagcggtcgcgccggcgagaaaggc
ctggccctgtcgctggtggcgccggccgaggccagccgcgcgcaggccatcgaggacctg
cagaagcagccgctggcctggtacgccctcggccagttgaaggccagcccggagccattg
ctgccgccgatgagcaccctgtgcatcgccggcggacgcaaggacaaggtgcgccccggc
gacctgctcggtgccctcaccggcgacgccgggctgcccggcagcgcggtgggcaagatc
gccatcttcgacttccaggccttcgtcgccatcgagcgcggcctcgcccaccaggccctc
aagcgcctgagcgaaggcaagatcaaggggcgctcgttcaaggtccgcctgctgtag
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