KEGG   Pseudomonas aeruginosa PAO1: PA0472
Entry
PA0472            CDS       T00035                                 
Name
(RefSeq) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PA0472
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pae03021]
    PA0472
Transcription machinery [BR:pae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PA0472
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Sigma70_ECF Rv2175c_wHTH HTH_24 MerR Sigma70_r3 HTH_17 FaeA HTH_AsnC-type
Other DBs
NCBI-GeneID: 880895
NCBI-ProteinID: NP_249163
UniProt: Q9I646
LinkDB
Position
complement(533509..534027)
AA seq 172 aa
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREP
RAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTL
SLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
NT seq 519 nt   +upstreamnt  +downstreamnt
gtgtcagcgggtgacgtcagcaacagcgaattcgtgggtagcctgtaccgggaccaccgc
ggctggctgcttgcctggctgaaccgcaacctcggctgccgccagcgcgccgaagacctc
agccaggacaccttcgttcgcctcctcggccgcccggagctgcccggcctgcgcgaaccg
cgcgcgttcctggcgaaggtggcgcgcggtctgatgatcgaccacttccgccgcgccgcc
cttgaacaggcctatctcgccgaactggcgctggttccggaagcggagcagccttcggcc
gaagagcagtacctgattctcgaggacctccgcgagatcgatcgcctgcttggcacgctg
tcgctgaaggcgcgtagcgcgtttctctatagccgcctggacggcatgccccacgcggag
atcgccgagcgtctcggagtctcggtgccgcgcgtgcgccaatacctggcccagggtctg
cgccagtgctacatcgccctctacggagagccccggtga

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