Pseudomonas aeruginosa PAO1: PA0472
Help
Entry
PA0472 CDS
T00035
Name
(RefSeq) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PA0472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pae03021
]
PA0472
Transcription machinery [BR:
pae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PA0472
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Rv2175c_wHTH
HTH_24
MerR
Sigma70_r3
HTH_17
FaeA
HTH_AsnC-type
Motif
Other DBs
NCBI-GeneID:
880895
NCBI-ProteinID:
NP_249163
UniProt:
Q9I646
LinkDB
All DBs
Position
complement(533509..534027)
Genome browser
AA seq
172 aa
AA seq
DB search
MSAGDVSNSEFVGSLYRDHRGWLLAWLNRNLGCRQRAEDLSQDTFVRLLGRPELPGLREP
RAFLAKVARGLMIDHFRRAALEQAYLAELALVPEAEQPSAEEQYLILEDLREIDRLLGTL
SLKARSAFLYSRLDGMPHAEIAERLGVSVPRVRQYLAQGLRQCYIALYGEPR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagcgggtgacgtcagcaacagcgaattcgtgggtagcctgtaccgggaccaccgc
ggctggctgcttgcctggctgaaccgcaacctcggctgccgccagcgcgccgaagacctc
agccaggacaccttcgttcgcctcctcggccgcccggagctgcccggcctgcgcgaaccg
cgcgcgttcctggcgaaggtggcgcgcggtctgatgatcgaccacttccgccgcgccgcc
cttgaacaggcctatctcgccgaactggcgctggttccggaagcggagcagccttcggcc
gaagagcagtacctgattctcgaggacctccgcgagatcgatcgcctgcttggcacgctg
tcgctgaaggcgcgtagcgcgtttctctatagccgcctggacggcatgccccacgcggag
atcgccgagcgtctcggagtctcggtgccgcgcgtgcgccaatacctggcccagggtctg
cgccagtgctacatcgccctctacggagagccccggtga
DBGET
integrated database retrieval system