KEGG   Pseudomonas aeruginosa PAO1: PA1804
Entry
PA1804            CDS       T00035                                 
Symbol
hupB
Name
(RefSeq) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
pae  Pseudomonas aeruginosa PAO1
Brite
KEGG Orthology (KO) [BR:pae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pae03032]
    PA1804 (hupB)
   03036 Chromosome and associated proteins [BR:pae03036]
    PA1804 (hupB)
   03400 DNA repair and recombination proteins [BR:pae03400]
    PA1804 (hupB)
DNA replication proteins [BR:pae03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    PA1804 (hupB)
Chromosome and associated proteins [BR:pae03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    PA1804 (hupB)
DNA repair and recombination proteins [BR:pae03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      PA1804 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 Barstar HU-CCDC81_euk_2
Other DBs
NCBI-GeneID: 878308
NCBI-ProteinID: NP_250495
UniProt: P05384
LinkDB
Position
1958759..1959031
AA seq 90 aa
MNKSELIDAIAASADIPKAVAGRALDAVIESVTGALKAGDSVVLVGFGTFAVKERAARTG
RNPQTGKPIKIAAAKIPGFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaacaagtcggaactgatcgatgcaattgccgcatctgctgatatcccgaaagctgtt
gccggtcgcgcactggacgcagtgatcgagtccgtcactggcgccctgaaggctggtgac
tccgtcgtgctggttggtttcggcaccttcgctgtcaaagagcgcgctgctcgcaccggt
cgcaacccgcaaactggcaagccgatcaagatcgccgctgccaagatcccgggcttcaaa
gccggtaaagccctgaaggatgctgtcaactaa

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