Pseudomonas aeruginosa PAO1: PA2840
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Entry
PA2840 CDS
T00035
Name
(RefSeq) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA2840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pae03019
]
PA2840
03009 Ribosome biogenesis [BR:
pae03009
]
PA2840
Enzymes [BR:
pae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA2840
Messenger RNA biogenesis [BR:
pae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA2840
Ribosome biogenesis [BR:
pae03009
]
Prokaryotic type
rRNA helicases
PA2840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-GeneID:
882823
NCBI-ProteinID:
NP_251530
UniProt:
Q9I003
LinkDB
All DBs
Position
complement(3193886..3195589)
Genome browser
AA seq
567 aa
AA seq
DB search
MGLCGCIRGKPMTQETVGFAALGIHPNVLAAIVAVGYEEPSPIQAQSIPLILEGHDMIGQ
AQTGTGKTAAFALPLLSRIDPSRREPQMLVLVPTRELALQVATACETYSKQLPGVGVVAV
YGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEKLLATVQRLVLDEADEMLKLGFMDD
LEVIFEALPESRQTVLFSATLPASIRGIAERHLKQPKHVKIAAKTQTVARIEQVHLMVHA
DQKAGSIQRLLEVEQFDALIAFVRTKQATLDYAELLERQGYRAAALNGDMPQAQRERVIE
SLKDGSLDIVIATDVAARGLDVPRITHVLNIDMPYDPESYVHRIGRTGRAGREGRALLLV
TPRERRMLQVIERVTGQKVGEVRLPDAETVLEARLARLAASLTPLLDSAVEQRGAVRDEL
CRRLGCDAETLAAALLARLTAGKALDLESVRREQPLTPSAPRERADRGERGERPERSGER
RPMAPPSEGRARCRTALGARDGVAAKNLLGAILNEGGLSREDIGRIQIRDTFSLIELPEA
NLERLLTKLKDTRVAGKALRLRRYRED
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgggtctttgcggatgtatacgaggcaaacccatgactcaggaaaccgtcggcttcgcc
gcgctcggtattcaccccaatgtgctcgcggcaatcgtcgccgtaggctacgaagagcct
tcgcctatccaggctcaatcgattccgctgatcctcgaaggccacgacatgatcggccag
gcgcagaccggtaccggcaagaccgccgcgttcgccctgccgctgctgtcgcgcatcgac
ccgagccgccgcgagccgcagatgctggtgctggtgccgacccgcgagctggccctgcag
gtcgccaccgcctgcgaaacctattccaagcaattgccgggcgtcggcgtggtcgccgtc
tacggcggcgcgcccatggggccgcagctgaaggccctgcgccagggcgcacagatcctc
gtcgctacccccggccgcctgtgcgaccacctgcgccgcgacgagaagctgctggccacc
gtccaacgcctggtgctcgacgaagccgacgagatgctcaagctcggcttcatggacgac
ctggaagtgatcttcgaggcgcttcccgaatcgcgccagaccgtgctcttctcggcgacc
ctgccggcgtccatccgtggcatcgccgagcgccacctgaagcagcccaagcacgtcaag
atcgccgccaagacccagaccgtggcgcgcatcgagcaggtccacctgatggtccatgcc
gaccagaaggccggttcgatccagcgtctgctggaagtcgagcagttcgacgcgctgatc
gccttcgtccgcaccaagcaggccaccctcgactacgccgaattgctcgagcgccagggc
taccgcgccgccgcgctcaacggcgacatgccgcaggcccagcgcgagcgggtcatcgag
tcgctgaaggacggttcgctggacatcgtcatcgccaccgacgttgccgcccggggcctg
gacgtaccgcgcatcacccacgtgctgaacatcgacatgccgtacgaccccgagtcctac
gtgcaccgcatcggccgtaccggccgtgccggccgggaagggcgcgcgctgttgctggtg
actccgcgcgagcggcgcatgctgcaggtgatcgagcgggtcaccgggcagaaggtcggc
gaagtccgcctgccggatgccgagaccgtgctggaggcccgcctggcgcgcctggccgcg
agcctgacgcccttgctcgacagcgccgtcgagcagcgcggcgcggtgcgcgacgagctg
tgccgtcgcctcggctgcgatgccgagaccctggccgccgcattgctggcacgcctgacc
gccggcaaggcgctggacctggagtcggtgcgccgcgaacagccgctgaccccatcggca
ccgcgcgagcgtgccgaccgtggcgaacgcggcgagcgtccggagcgcagcggcgagcgt
cgtccgatggcgccgccgagcgaaggccgtgcccgctgccgcactgccctcggcgcgcgc
gacggggttgcggcgaagaacctgctgggcgcgatcctcaacgagggcggcctgtcccgc
gaggacatcggtcgcatccagattcgcgataccttcagcctgatcgagctgcccgaggcc
aatctcgagcgcctgctgaccaagctcaaggacacccgcgtcgccggcaaggccctgcgc
ctgcgccgctatcgcgaggactga
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