Pseudomonas aeruginosa PAO1: PA3308
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Entry
PA3308 CDS
T00035
Name
(RefSeq) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pae
Pseudomonas aeruginosa PAO1
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pae03021
]
PA3308
Transcription machinery [BR:
pae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PA3308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PRKG1_interact
Motif
Other DBs
NCBI-GeneID:
882473
NCBI-ProteinID:
NP_251998
UniProt:
Q9HYT6
LinkDB
All DBs
Position
3707090..3709942
Genome browser
AA seq
950 aa
AA seq
DB search
MDMAQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFAP
GDEVTHFEGWKMTVREVEESEGLLVYHGLTAQNEQRTLPETQLSNFIQFRLASDRLFAGQ
IDPLPWFSLRYHTLERRSQLLQSSLWGLGGARAQPIAHQLHIAREVADRMAPRVLLADEV
GLGKTIEAGLIIHRQLLSGRAGRVLILVPENLQHQWLVEMRRRFNLQVALFDKERFAESD
ASNPFEDTQLALVALEWLKEDERAQDALFAAGWDLLVVDEAHHLVWHQDQVSAEYALVEQ
LAEIIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLEAFRRESEQYRPVAEAVQELLD
HGSLSAGARKAIHGFLGSEGDELLASVEGGDEEARSRLVRELLDRHGTGRVLFRNTRAAV
QGFPQRELHAYPLPMPSQYEELPAGEHPDLYPEVNFQQQWEDGDDNNRWWRFDPRVEWLI
DTLKMLKQFKVLVICAHAETALDLEDALRLRSGISATVFHEGMSILERDRAAAYFADEEF
GAQVLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQRHTIQLHVPHLEN
SAQQRLFQWYHQALNAFLNTCPTGNALQHEFGPRLLPLLDGGEDKAWDALLAEGRARREA
LEAELHSGRDRLLELNSGGAGEGEALVEAIEEQDDDFALPIYMERLFDAYGIHSEDHSEN
ALILKPSEKMLDAGFPLGDDEGVTITYDRAQALAREDMQFLTWEHPMVQGGMDLVLSGSM
GNTSVALIKNKALKPGTVLLELLFVSEAVAPRALQLGRWLPPQALRCLLDANGNDLAGRV
SLETLNDQLESVPRVSANKFVQAQRDVLAKQFDVAEGKIVPRHEERVARAKQQFAAAMDE
ELARLTALKAVNPSVRDSELDSLRTQREEGLALLDKASLRLEAIRILVAG
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtggacatggcgcagtatcaaccggggcaacgctggatcagcgacagtgaagcggaattg
ggcctggggaccatcctggcccaggatggccgcctgctcaccgtgctctatccggcgacc
ggcgatacccgccaatacgccttgcgcaatgcgccgctgacccgcgtgcgcttcgccccc
ggcgatgaagtgacgcacttcgaaggctggaagatgaccgttcgcgaggtcgaggaaagc
gaaggcctattggtgtaccacggcctcaccgcgcagaacgagcagcgcaccctgccggaa
acccagctctccaacttcatccagttccgcctcgccagcgaccgtctgttcgccggacag
atcgatcccctgccctggttctccctgcgctaccacactctcgaacgccgcagccaactg
ctccagtcctcgctctggggcctcggcggcgcccgcgcccagccgatcgcccaccagttg
cacatcgcccgcgaagtcgccgaccgcatggcgccgcgcgtcctgctggccgacgaagtg
ggcctgggcaagaccatcgaggccggcctgatcatccatcgccagttgctctccggccgc
gccgggcgggtgctgatcctggtcccggaaaacctccagcaccagtggctggtggagatg
cgccggcgcttcaacctgcaggtggccctgttcgacaaggagcgcttcgccgaaagcgat
gccagcaatcccttcgaggacacccagttggccctggtcgccctggagtggctgaaggaa
gacgaacgcgcccaggacgccctgttcgccgccggctgggacctgctggtggtcgacgaa
gcccaccacctggtctggcaccaggaccaggtcagcgccgaatacgcgctggtcgagcaa
ctggcggagatcattcccggcgtcctgttgctcaccgcgaccccggagcaactcggccag
gacagccacttcgcgcgcctgcgcctgctcgatccgaatcgtttccacgacctcgaagcg
ttccgccgggagagcgagcaatatcgtccggtcgccgaagcggtgcaggaactgctcgac
cacggcagtctttccgccggcgcgcgcaaggccatccacggcttcctcggcagcgagggc
gacgagctgctggccagcgtcgagggcggcgatgaagaagctcgctcgcgcctggtccgc
gagctgctcgaccgccacggcaccggtcgcgtgctgttccgcaacacccgtgccgccgtg
cagggcttcccccagcgcgaactgcacgcctatccgttgccgatgccgagccagtacgag
gaattgccggccggcgaacacccggacctgtatccggaagtgaatttccagcagcagtgg
gaagacggcgacgacaacaaccgctggtggcgcttcgacccgcgcgtcgagtggctgatc
gataccctgaagatgctcaagcagttcaaggtcctggtcatctgtgcccacgccgagacg
gccctcgacctggaagacgccctgcgcctgcgttcgggcatctccgccacggtgttccac
gaaggcatgagcattctcgagcgcgaccgcgccgccgcctacttcgccgacgaagagttc
ggcgcccaggtgctgatctgctcggaaatcggcagcgaaggccgcaacttccagttcgcc
caccatctggtgctgttcgacctgccggcccacccggacctgctcgagcagcgcatcggc
cgcctcgaccggatcggccagcgacacaccatccagttgcacgtaccgcacctggagaac
agcgcccagcagcgcctgttccagtggtatcaccaggcgctgaacgccttcctcaatacc
tgccccaccggcaacgccctgcaacacgagttcggcccgcgcctgctgccgctgctcgac
ggcggcgaggacaaggcctgggacgcgctgctcgccgaaggccgcgcccgtcgcgaagcc
ctcgaagcggagctgcacagcggtcgcgaccgcctgctggagctgaactccggcggcgcc
ggcgaaggcgaggcgctggtggaggccatcgaggaacaggacgacgacttcgccctgccg
atctacatggagcgcctgttcgacgcctacggcatccacagcgaagaccattcggaaaat
gccctgatcctcaagccaagcgagaagatgctcgacgccggcttccccctcggcgacgac
gaaggcgtgaccatcacctacgaccgtgcccaggcgctggcccgcgaggacatgcagttc
ctcacctgggaacatccgatggttcagggcggcatggacctggtgctgtccggctcgatg
ggcaacacctcggtggcgctgatcaagaacaaggcgctgaagcccggcaccgtgctgctc
gaactcctgttcgtcagcgaagccgtggcaccgcgcgccctccagctcggccgctggctg
ccgccgcaggccctgcgctgcctgctcgacgccaacggcaacgacctggccggccgggtg
tccctggaaaccctcaacgaccagctggaaagcgtgccacgggtcagcgccaacaagttc
gtccaggcccagcgcgatgtgctggccaagcagttcgacgtggccgagggcaagatcgtc
ccgcgccacgaggaacgcgtggccagggccaagcagcagttcgccgccgccatggacgag
gaactggcgcgcctgaccgcgctcaaggcggtcaacccgagcgtccgcgacagcgagctg
gacagcctgcgcacccagcgcgaggaaggcctggccctgctcgacaaggcctccctgcgc
ctcgaggcgatccgcatcctggtcgccggctga
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