Pseudomonas aeruginosa PAO1: PA3950
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Entry
PA3950 CDS
T00035
Name
(RefSeq) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA3950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pae03019
]
PA3950
Enzymes [BR:
pae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PA3950
Messenger RNA biogenesis [BR:
pae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PA3950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
878847
NCBI-ProteinID:
NP_252639
UniProt:
Q9HX66
LinkDB
All DBs
Position
complement(4430599..4431948)
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AA seq
449 aa
AA seq
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MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR
QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIE
TLIGQTLQRREEPDFEPEHRVPQTAPGGVVLKKPKKPKKPKAAESVGKPGKIHLGSWFDS
SAPTVKAVRKAPGFGAGAAGKPKKRPSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcttccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
cacggcacgcctacgccgatccaggcccaagccatacccccggcgctcaagggccgcgac
ctgctcgccgcagcacagaccggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcggctgaccctggaggggccgcaggtcgctgcgaactcggtgcgtgcactggtcctg
gtcccgacccgcgaactggccgagcaggtccacgccagcgtccgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctacggtggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggagtggatatcctcgtcgccactcccgggcggctgctcgacctgtatcgg
cagaacgcggtgaagttcgcccagctccaggcgttggtgctggacgaagccgatcgcatg
ctcgacctcggtttcgcccgcgagctggacgaactgttcgccgcgctgccgcgcaagcgc
cagaccctgctgttttccgcgaccttctccgacgccatccgcacgctggcccgtgaactg
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggccgagctgttctgccacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccgcaagagcgtcgaggaactg
gtcggactgttgcagcggcagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcggctgcgcgccttgcagcggttcaaggccggcgaggtagacctgctggtagcc
accgacgtggccgcgcgtggcctggatatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcatcgcatcggccgtaccggccgtgccggtgcc
tccggccaggcggtgtcgctggtctgcgccgacgaagtggagctgctggcggcgatcgaa
acactgatcgggcagaccctgcaacgccgcgaggagcccgacttcgagccggagcaccgg
gtgccgcagaccgcaccgggcggcgtggtgctgaagaaaccgaagaagccgaagaaaccc
aaggccgcggagagcgtcggcaagcccggcaagatccacttgggcagttggttcgacagc
agcgcgccgacggtcaaggcggtgcgcaaggcaccgggcttcggcgcgggtgcggcgggc
aagccgaagaagcggccgtccggcaaatag
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