Pseudomonas aeruginosa PAO1: PA3989
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Entry
PA3989 CDS
T00035
Symbol
holA
Name
(RefSeq) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03030
DNA replication
pae03430
Mismatch repair
pae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA3989 (holA)
03430 Mismatch repair
PA3989 (holA)
03440 Homologous recombination
PA3989 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pae03032
]
PA3989 (holA)
03400 DNA repair and recombination proteins [BR:
pae03400
]
PA3989 (holA)
Enzymes [BR:
pae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PA3989 (holA)
DNA replication proteins [BR:
pae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PA3989 (holA)
DNA repair and recombination proteins [BR:
pae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PA3989 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
DUF7119
Motif
Other DBs
NCBI-GeneID:
878936
NCBI-ProteinID:
NP_252678
UniProt:
Q9HX31
LinkDB
All DBs
Position
4470274..4471311
Genome browser
AA seq
345 aa
AA seq
DB search
MKLTPAQLAKHLQGPLAPVYVVSGDEPLLCQEACDAIRQACRERDFGERQVFNAEANFDW
GLLLEAGASLSLFAEKRLIELRLPSGKPGDKGAAILQEYLQRPPEDTVLLLGLPKLDGST
QKTKWAKALIDGNAAQFIQVWPVDVHQLPQWIRQRLSQAGLSASPEALELIAARVEGNLL
AAAQEIEKLKLLAEGNQIDAATVQAAVADSARFDVFGLIDAALGGEAAHALRILEGLRGE
GIEPPVILWGLAREIRLLAGLSQQYGQGIPLEKAFAQARPPVWDKRRPLLTRALQRHSSS
RWNQMLRDAQLIDAQIKGQAPGSPWSGLSLLALSLAGQRLGLPAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactcccgcgcaactcgccaagcacctccagggccccctggcgcccgtctat
gtcgtcagcggcgatgaaccgctgctctgccaggaagcctgcgatgccattcgccaggcc
tgccgcgagcgcgacttcggcgagcgccaggtattcaatgccgaagccaacttcgattgg
ggcttgctgctggaggccggcgccagcctgtcgctgttcgccgagaagcgcctgatcgaa
ctgcgcctgccctccggcaagcccggcgacaaaggcgcggcgattctccaggaatacctg
caacggccgccggaagacaccgtgctcctgctcggtctgcccaagctcgatggcagcacg
cagaagaccaagtgggccaaggccctgatcgatggcaacgccgcgcagttcatccaggtc
tggccggtcgacgtccaccagttgccgcagtggattcgccagcgcctgtcccaggctggc
ctgtccgccagccccgaagccctggagctgatcgccgcgcgcgtggaaggcaacctgctc
gccgccgcccaggaaatcgaaaagctcaagctgctcgccgagggcaaccagatcgacgcc
gccaccgtacaggccgcggtcgccgacagcgcacgcttcgatgtcttcggcctgatcgac
gctgcccttggcggtgaagcggcccacgccctgcgcatcctggaaggactgcgcggcgaa
ggcatcgagccgccggtgatcctctggggcctggcccgcgagatccgcctgctggctggc
ctgtcccagcaatacggccagggcatcccgctggagaaagccttcgcccaggcgcgtccg
ccggtctgggacaagcgccgtccgctgctgacccgtgccctgcaacgccactccagcagc
cgctggaaccagatgctgagggatgcccagttgatcgacgcgcagatcaagggacaggca
cccggcagcccctggagcggtctctcgcttctcgccctgagcctcgccggccagcgcctc
ggcctgccggcagcctga
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