Pseudomonas aeruginosa PAO1: PA4172
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Entry
PA4172 CDS
T00035
Name
(RefSeq) nuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PA4172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pae03400
]
PA4172
Enzymes [BR:
pae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PA4172
DNA repair and recombination proteins [BR:
pae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PA4172
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF7939
Motif
Other DBs
NCBI-GeneID:
880276
NCBI-ProteinID:
NP_252861
UniProt:
Q9HWK9
LinkDB
All DBs
Position
4668490..4669290
Genome browser
AA seq
266 aa
AA seq
DB search
MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ
GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDGLLVASLYLPNGNPQPGPK
FDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPESRECF
ERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDAGVDR
WVRGEEHASDHAPAWVSLRRPSEPRR
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccctgaagatcgccaccttcaacgtcaacggcatccagacccggctggccgcg
ctgctggcctggctggagcgggaagcgccggacatcgtctgcctgcaggaactgaaaacg
cccgacgcgcgcttccccgccgcggcgctggagaaggccggatacggcgcgatctggcag
ggccagtcggcgtggaacggcgtcgccatcctcgcccgcgacagccagccgctggaggta
cgccgcggcctgccgggcaacgccagcgatccccacagccgctacctcgaagcggccgtc
gacggcctgctggtggccagcctgtacctgcccaatggcaatccccagccgggaccgaag
ttcgactacaagctggcctggttcgagcacctcatccgacacgccgccgagctgatggag
agcggccatccggtggtgctggccggcgacttcaacgtggtgcccagcgacttcgatatc
tacgacacccgctcctggaaaaaggacgccctgctccagccggagtcccgcgagtgcttc
gagcgcctcctgcggcagggctgggtggacgcgctacgccagcgtttccccgaccggcgc
ctctataccttctgggactacttccgccagcactggcaacgcgacgccgggctgcgcatc
gaccacctgctgctcagcgccagcctggcggaccacctggaagacgccggggtggatcgc
tgggtgcgcggcgaggagcacgccagcgaccacgcgccggcctgggtaagcctgcggcgt
ccctcagagccccggcgctag
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