Pseudomonas aeruginosa PAO1: PA4238
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Entry
PA4238 CDS
T00035
Symbol
rpoA
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PA4238 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pae03021
]
PA4238 (rpoA)
03400 DNA repair and recombination proteins [BR:
pae03400
]
PA4238 (rpoA)
Enzymes [BR:
pae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PA4238 (rpoA)
Transcription machinery [BR:
pae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PA4238 (rpoA)
DNA repair and recombination proteins [BR:
pae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PA4238 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AMIN-like
Motif
Other DBs
NCBI-GeneID:
881813
NCBI-ProteinID:
NP_252928
UniProt:
O52760
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(4754423..4755424)
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSQTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGSGVVTAADIQLDHD
VEIINGDHVIANLADNGALNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVR
RVSYVVENARVEQRTNLDKLVLDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccacatcgatgtgcaggtggtcagt
caaacccgcgccaagatcacgctcgagcctctcgagcgtggttttggtcacaccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgcgcagtggtcgaggccgag
atcgacggcgtactccacgagtactcggcgatcgaaggtgtgcaggaagatgtaatcgag
atcctgctgaacctgaaaggtctggccatcaagctgcacggtcgtgatgaagtgacgctg
accctggctaagaagggctcgggtgttgtgactgctgccgatattcagctggatcacgat
gttgagatcatcaacggtgaccacgttatcgccaacctggcagacaacggcgcgctgaac
atgaagctgaaggtagctcgtggccgtggctacgagcctgccgacgcacgtcagagcgat
gaagacgaaagccgcagcatcggccgtctgcagctcgacgcatcgttcagcccggtccgt
cgtgtctcctacgtggtggaaaacgcccgtgtcgagcagcgcaccaacctggacaaactg
gtcctggacctggaaaccaacggcactctggatcccgaagaggctatccgtcgcgccgct
accatcctgcaacagcagctggcagcgttcgtggacctcaagggcgacagcgaacccgtc
gttgaagagcaggaagacgagatcgatccgatcctcctgcgcccggtcgatgacctggaa
ctgaccgtacgttcggccaactgcctgaaggcggaaaacatctactacatcggtgacctg
atccagcgcaccgaagtggaactgttgaaaacgccgaacctgggcaagaagtccctgacc
gaaatcaaggacgttctggcttcccgtggtctgtccctcggtatgcgcctcgataactgg
ccgccggcaagtcttaagaaagacgacaaggccactgcctga
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