Pseudomonas aeruginosa PAO1: PA4944
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Entry
PA4944 CDS
T00035
Symbol
hfq
Name
(RefSeq) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae02024
Quorum sensing
pae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PA4944 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PA4944 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pae03019
]
PA4944 (hfq)
03036 Chromosome and associated proteins [BR:
pae03036
]
PA4944 (hfq)
Messenger RNA biogenesis [BR:
pae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PA4944 (hfq)
Chromosome and associated proteins [BR:
pae03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PA4944 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Motif
Other DBs
NCBI-GeneID:
878015
NCBI-ProteinID:
NP_253631
UniProt:
Q9HUM0
Structure
PDB
LinkDB
All DBs
Position
complement(5548397..5548645)
Genome browser
AA seq
82 aa
AA seq
DB search
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSGDQPAEPGNA
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagggcattcgctacaagacccttacctcaataccctgcggaaagaacgcgtc
ccggtttccatctatctggtcaacggcatcaagctgcaaggccagatcgagtctttcgac
cagtttgtcatcctgctgaagaacaccgtcagccagatggtttacaagcacgcgatctcc
accgtggtaccgagccgtccggtgcgtctgccgagcggtgaccagccggccgagccgggc
aacgcttga
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