KEGG   Pseudomonas aeruginosa PAO1: PA4944
Entry
PA4944            CDS       T00035                                 
Symbol
hfq
Name
(RefSeq) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
pae  Pseudomonas aeruginosa PAO1
Pathway
pae02024  Quorum sensing
pae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PA4944 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PA4944 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pae03019]
    PA4944 (hfq)
   03036 Chromosome and associated proteins [BR:pae03036]
    PA4944 (hfq)
Messenger RNA biogenesis [BR:pae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PA4944 (hfq)
Chromosome and associated proteins [BR:pae03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PA4944 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-GeneID: 878015
NCBI-ProteinID: NP_253631
UniProt: Q9HUM0
Structure
LinkDB
Position
complement(5548397..5548645)
AA seq 82 aa
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVRLPSGDQPAEPGNA
NT seq 249 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcattcgctacaagacccttacctcaataccctgcggaaagaacgcgtc
ccggtttccatctatctggtcaacggcatcaagctgcaaggccagatcgagtctttcgac
cagtttgtcatcctgctgaagaacaccgtcagccagatggtttacaagcacgcgatctcc
accgtggtaccgagccgtccggtgcgtctgccgagcggtgaccagccggccgagccgggc
aacgcttga

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