Pseudomonas aeruginosa PAO1: PA5418
Help
Entry
PA5418 CDS
T00035
Symbol
soxA
Name
(RefSeq) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pae
Pseudomonas aeruginosa PAO1
Pathway
pae00260
Glycine, serine and threonine metabolism
pae01100
Metabolic pathways
Module
pae_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pae00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PA5418 (soxA)
Enzymes [BR:
pae01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PA5418 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PA5418 (soxA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
DAO
HI0933_like
Pyr_redox_3
FAD_binding_3
Pyr_redox
Thi4
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
880824
NCBI-ProteinID:
NP_254105
UniProt:
Q9HTE6
LinkDB
All DBs
Position
6097024..6100041
Genome browser
AA seq
1005 aa
AA seq
DB search
MSQINRLSSGGRIDRNRPLTFSFNGQHYQGYAGDTLAAALLANGVDIVGRSFKYSRARGI
VAAGAEEPNAILQIGSREATQIPNVRATQQALYGGLVATSTNGWPNVQNDLMGIFGKVGG
KLMPPGFYYKTFMYPQSMWMTYEKYIRKAAGLGRAPTEVDPDSYDWMNHHCDVLVVGAGP
AGLAAALAAARSGARVILADEQEEFGGSLLDTRETLDGKPAAEWVADAVAELQGLPEVIL
LPRSTVNGYHDHNFLTIHERRTDHLGEVAPLGQVRQRVHRVRAKRVVLAAGAHERPLVYG
NNDLPGNMLAGAVSTYVRRYGVAPGKKLVLATNNDYAYRVALDWQEAGLQVVAIADARAN
PRGEWVEEARQRGMRVITGSSVIEARGGKRVSGAKVARIDLQAMRASGGEWLDCDLIASS
GGYSPVVHLASHLGGKPEWREEILAFVPGEGLQKRICAGAVNGVFGLAEVLADGYQAGSR
AALDAGYKTAAGSLPKVQPRREEASVALFQVPHEKPTARAPKQFVDPQNDVTAAAIELAC
REGFESIEHVKRYTALGFGTDQGKLGNINGLAIAARAQGKSIADTGTTMFRPNYTPVTFG
AVAGRHCGHLFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPRRGEDMHAAVARECRAV
REAVGLLDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGVT
ACLADNHFVMTTTTGGAARVLEWLELYHQTEWPELKVYFTSVTDHYATLTLSGPNSRKLL
AEVTDIDLDKDAFPFMTWKEGKVAGVPARVFRISFTGELSYEVNVQADYAMGVLEALAEH
GAKYGLTPYGTETMHVLRAEKGFIIVGQDTDASVTPDDLNMGWAVGRSKPFSWIGWRGMN
RADCLREDRKQLVGLRPSNPQEVLPEGAQLVFDTQQAIPMKMVGHVTSSYMSASLGHGFA
LAVVKGGLKRMGQKVYAPLADGRFIEAEICSSVFYDPKGERQNVD
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcaatcgcctgtccagcggcggccgcatcgaccgcaaccgcccgctgacc
ttcagcttcaacggccagcactaccagggctatgccggcgacaccctggccgccgcgctg
ctggccaacggcgtcgacatcgtcggccgcagcttcaagtactcgcgggcgcgcggcatc
gtcgccgccggcgccgaggagcccaacgcgatcctgcagatcggctcccgcgaagccacc
cagatccccaacgtacgcgccacccagcaggccctctacggcggcctggtggccaccagt
accaacggctggccgaacgtgcagaacgacctgatgggaatcttcggcaaggtcggcggc
aagctgatgccgcccggtttctactacaagaccttcatgtacccgcagtcgatgtggatg
acctacgagaagtacatccgcaaggccgccggcctgggccgcgcgccgaccgaggtcgat
ccggacagctacgactggatgaaccaccactgcgacgtgctggtggtcggcgccggcccg
gccggcctggccgccgccctcgccgccgcccgcagcggcgcgcgggtgatcctcgccgac
gagcaggaagagttcggcggcagcctgctggacacccgcgagaccctcgacggcaagccc
gccgccgagtgggtcgcggacgccgtggccgagctgcaaggcctgccggaagtcatcctg
ctaccgcgctccacggtcaacggctaccacgaccacaacttcctcaccatccacgagcgg
cgcaccgaccacctcggcgaggtcgccccgctcggccaggtccgccagcgtgtgcaccgc
gtgcgcgccaagcgcgtggtactggccgccggcgcccatgagcggccgctggtctacggc
aacaacgacctgcccggcaacatgctcgccggcgcggtttccacctatgtacggcgctac
ggcgtggcaccgggcaagaaactggtgctggccaccaacaacgactacgcctaccgcgtc
gccctcgactggcaggaagccggcctgcaagtggtggccatcgccgacgcccgggccaat
ccgcgcggcgagtgggtcgaggaagcacgccaacgcggtatgcgggtgatcactggcagt
tcggtgatcgaggctcgcggcggcaagcgggtcagcggcgccaaggtcgcccggatcgac
ctgcaggccatgcgcgccagcggcggcgaatggctggactgcgacctgatcgccagctcc
ggcggctacagcccggtcgtgcacctggcctcgcacctgggcggcaagccggaatggcgc
gaggaaatcctcgccttcgtccccggcgaaggcctgcagaagcgcatctgcgccggcgcc
gtgaacggcgtgttcgggctcgccgaggtgctcgccgacggctaccaggccgggagtcgc
gccgccctcgacgccggctacaagaccgccgccggcagcctgccgaaggtccagccgcgc
cgcgaggaagcgtcagtcgcgctgttccaggtgccccacgagaagcccacggcgcgcgcg
ccgaagcagttcgtcgatccgcagaacgacgtcaccgccgccgccatcgaactggcctgc
cgcgagggcttcgagtccatcgagcacgtcaagcgctacaccgcgctgggcttcggcacc
gaccagggcaagctgggcaacatcaacggcctggcgatcgccgcgcgggcccagggcaag
agcatcgccgacaccgggaccaccatgttccgtccgaactacaccccggtgaccttcggc
gccgtcgccggccgccactgcgggcacctgttcgaaccggtgcgcttcaccgccctgcac
gcctggcacgtgaagaacggcgccgagttcgaagacgtcggccagtggaagcggccgtgg
tacttcccgcgccggggcgaggacatgcacgccgccgtggcccgcgaatgccgcgcagtg
cgcgaggcggtcggcctgctcgacgcctcgaccctgggcaagatcgacatccagggcccg
gacgcgcgggagttcctcaaccgggtctacaccaacgcctggaccaagctcgacgtcggc
aaggcgcgctacggcctgatgtgcaaggaagacgggatggtcttcgacgacggcgtgacc
gcctgcctggccgacaaccacttcgtcatgaccaccaccaccggcggcgccgcccgcgta
ctggagtggctggagctgtaccaccagaccgaatggccggagctgaaggtgtacttcacc
tcggtcaccgaccactacgcgaccctcaccctgtccggcccgaacagccgcaagctgctc
gccgaagtcaccgacatcgacctggacaaggatgccttccccttcatgacctggaaggaa
ggcaaggtcgccggggtgccggcgcgggtgttccgcatctccttcaccggcgagctgagc
tacgaggtgaacgtccaggccgactacgccatgggcgtgctcgaagcgctcgccgagcac
ggcgcgaagtacggcctgacgccctacggcaccgagacgatgcacgtcctgcgcgccgag
aagggcttcatcatcgtcggccaggacaccgatgcctcggtcaccccggacgatctcaac
atgggctgggcggtgggccgcagcaagccgttctcctggatcggctggcgcggcatgaac
cgcgccgactgcctgcgcgaggatcgcaagcaactggtcggactcaggccgagcaacccg
caggaggtactgcccgaaggcgcgcaactggtgttcgacacccagcaggcgatcccgatg
aagatggtcggccacgtcacctccagctacatgagcgccagcctcggccacggcttcgcc
ctggcggtggtgaaaggcggcctcaagcgcatgggccagaaggtctacgcgccgctggcg
gacggccgcttcatcgaggcggagatctgctcctcggtgttctacgaccccaaaggggag
cggcagaacgtggattga
DBGET
integrated database retrieval system
