Paenibacillus sp. FSL R7-0273: R70723_19185
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Entry
R70723_19185 CDS
T03356
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paea
Paenibacillus sp. FSL R7-0273
Pathway
paea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R70723_19185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paea03019
]
R70723_19185
Enzymes [BR:
paea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
R70723_19185
Messenger RNA biogenesis [BR:
paea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
R70723_19185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SUa-2TM
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AIQ47781
LinkDB
All DBs
Position
complement(4340900..4342492)
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AA seq
530 aa
AA seq
DB search
MTFNDLGLSPAILKALDLANYTSPTPIQKEAIPAALTGRDVLGCAQTGTGKTAAFSLPII
QLLAKQTVNRNGKRPIRSLILTPTRELALQIYENIQVYSKYTGIRSTAVVGGVSQRSQER
ALALGADILIATPGRLIDLISQKHADLQHVQMLVLDEADRMLDMGFIHDVKRIIAKMPAK
KQTLFFSATMPQEISQLIKTLLVNPVKIEITPVSSTVDRIEQSVYLLENGFKQKLLNRLL
EDKSIVSALVFTRTKRGADRVARDLAKVNITAQAIHGNKSQNERQNALRNFKSGVTRVLV
ATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGMSGIAISLCEAEELPYLKDI
QKLIGKTIPEVKNHPYPMIKVNPALAAEVAKASKAAGSGKAAAPAKPKAKTNPARKPKEE
WFTQGSRPRSGQGGSKGNGAGGRQHAEPNASGSRSAGGARAVGAGREQTGGARAAGAGRE
QTGGARAAGAGREQSGGARAAGAGREHSGGARTTGADRAAGSRAGGSGRN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaatgacttgggtctgagcccggcaattttgaaggcgcttgaccttgctaac
tatacatcacctacaccgattcaaaaggaagctattcccgcagcattgaccggaagagat
gtgctgggctgtgcgcagaccggaacggggaagacggcagctttttctctgcctattatt
cagctgcttgccaagcagacggttaaccggaacggcaaacgcccaatccgttcactgatt
ctgacccctacccgtgagctggcgctgcaaatctatgagaatattcaggtctacagcaag
tataccggcatccgctctacggctgttgtcggcggtgtctcccagagatcccaggaacgt
gctttggcactgggtgcggatatcctgattgctactccaggccgtctgattgatctaatc
tctcaaaagcatgccgatctgcagcatgtgcagatgctggtgctggatgaagcggaccgg
atgcttgatatgggcttcatccatgatgtgaagcggatcatcgccaaaatgccggcgaag
aagcagaccctgttcttctctgcgacaatgccgcaggagatttcacagctgatcaaaacc
ctgcttgtcaatccggtgaaaatcgaaatcactcccgtttcttcgacagtagaccggatt
gagcagtccgtctatctgctggaaaacggctttaagcaaaagctgctgaaccggctgctg
gaggataaatccattgtgtctgcacttgtctttacccgtacaaaacgcggagcagaccgg
gtagcacgtgatttggccaaggttaatattaccgcccaggcgatacacggcaacaagtcg
cagaatgaacggcaaaatgcgctgcgcaatttcaaaagcggggtaacccgtgtgctggtg
gctaccgatatcgctgcccggggaattgacattgacgagctgtcgcatgtgatcaacttc
aacctgccgaatattccggagacgtatgtacaccggattggccggaccggccgtgcaggc
atgagcggtatcgctatttccctgtgcgaagcggaggagctgccgtacctgaaggatatc
cagaagctgatcggcaaaacgatccctgaagtgaaaaatcatccgtatccgatgattaag
gtgaatccggcgctggcggcagaggttgccaaggcgagtaaggcggccggctctggaaag
gctgctgcacctgcaaaaccaaaggcaaaaaccaacccggcacgcaagccgaaggaagaa
tggttcacgcagggcagccgcccgcgcagcggacagggtggctccaagggcaacggtgca
ggcggcagacagcatgccgagcctaacgcaagcggcagccgcagtgctggcggagcgcgg
gctgtaggagctggcagagagcagactggcggagcgcgggctgctggagctggcagagag
cagactggcggagcgcgggctgctggagctggtagagagcagagcggcggagcgcgggct
gcaggagctggtagagagcatagcggcggagcgcgaactactggagctgacagagcggca
ggaagccgcgccggcggaagcggacgaaactag
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