KEGG   Paenibacillus sp. FSL R7-0273: R70723_19310
Entry
R70723_19310      CDS       T03356                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
paea  Paenibacillus sp. FSL R7-0273
Pathway
paea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    R70723_19310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paea03019]
    R70723_19310
Messenger RNA biogenesis [BR:paea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     R70723_19310
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 AP_endonuc_2 Lactamase_B_6 PEP_mutase
Other DBs
NCBI-ProteinID: AIQ47803
LinkDB
Position
complement(4365748..4367430)
AA seq 560 aa
MSKKNNNNEKLTIFALGGVGEIGKNMYVVQYANDIVVVDAGLKFPEEDMLGIDIVIPDIS
YLTENRDKVRGIVLTHGHEDHIGGLPYVLKNLNVPVYGTRLTLGLVENKLKEANLLGETK
RILINEDSVIDLGTSLQVTFFRTNHSIPDSVGVCIETPEGNVVHTGDFKFDHTPVNGQYA
NLHRMAEIGQKGVLALMSDSTNAEKPGFTPSEKNVGIVLEDIFRKADQRVVVATFASNVH
RIQQVVNAAESTGRKITVIGRSMVNVVAIASELGYLHVPDGMLIEPEEMNRMAANRVVVL
CTGSQGEPMSALTRMARSSHRKVDILPGDTVIIAATPVPGNEKYVGRTIDELFRLGANVI
YSGSNSGVHVSGHGSQEELKLMLNLMKPKYFIPIHGEFRMQRRHALLAESVGVEPSNIFI
TEIGEVIEIQGGGARRAGKVTAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSK
QNGAIVSGPDIISRGFVYVRESEGLLDEANRIVSSTLQRLMSEKVNEWASLKTSVKDSLG
RFLYEQTRRRPMILPIIMEV
NT seq 1683 nt   +upstreamnt  +downstreamnt
ttgtccaaaaaaaataacaacaacgaaaagctaacgattttcgctttgggcggggtcggg
gaaatcggtaaaaacatgtatgtagtccaatatgctaacgacattgtggtcgtggatgca
ggactcaaattcccggaagaggatatgctcggtattgatattgttatcccagacatctca
tacctgacagagaaccgtgacaaggttagagggattgtcctcactcacggacatgaggat
cacatcggcggactgccgtatgtactcaagaacctgaatgttcccgtatacggaacaaga
cttacactcggcctggtcgagaacaagctgaaggaagccaatctgcttggcgaaacaaag
cgcattctgatcaatgaagattcggttattgacctgggaacttccctgcaggtaactttc
ttcagaactaaccacagtattccggactctgtaggcgtatgcattgagacaccggaaggt
aatgttgttcatacaggtgacttcaaatttgaccatacaccggttaacgggcaatatgcg
aacctgcaccggatggccgaaatcggccagaagggcgtgcttgcccttatgtcagacagc
accaatgctgagaagccgggctttacaccttctgagaagaatgtcggcatcgtgctggag
gatatcttccgcaaggctgaccagcgtgtagttgtggcgacctttgcctctaacgtgcac
cgcatccagcaggtggttaatgccgctgaatccaccggccgcaagattaccgtaatcgga
cgcagcatggttaacgtagttgccattgcttccgagcttggctatctgcatgtaccggac
ggtatgctgattgagcctgaggaaatgaaccgcatggctgctaaccgcgttgttgtgctc
tgcacaggcagccagggagagccgatgtcggcacttacccgcatggcccgctccagtcac
cgtaaggtggatatcctgccgggagataccgttatcattgcggcaactccggttccgggc
aacgagaaatatgttggccgtaccattgatgaactgttccgcctcggtgccaatgtaatc
tacagcggctcgaactccggcgttcacgtatccggccacggcagccaggaagagctcaag
ctaatgcttaacctgatgaagccgaaatacttcattccaatccacggtgaattccggatg
cagcgcagacatgcgcttctggcagaatccgtcggcgtggagccaagcaatatcttcatc
accgaaattggtgaagtcattgaaattcagggcggcggagcccgcagagccggtaaggtt
actgccggtaacgtgctgattgacggtctgggtgtcggcgatgtgggtaacatcgtactg
cgcgaccgcaagctgctgtcccaggacggtatcctggtagttgttgtaacgctgagcaag
cagaatggagcgattgtctccgggccggatatcatttcccgcggctttgtatatgtccgc
gagtccgaaggactgctggatgaagccaaccgcattgtatccagcacgctgcagcgcctg
atgagcgagaaggtcaacgaatgggcttccctcaagaccagcgtcaaagattcgctcgga
cgcttcctgtacgaacagacgcgccgcagaccgatgattttgccgatcattatggaagtg
taa

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