Paenibacillus sp. FSL R7-0273: R70723_19665
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Entry
R70723_19665 CDS
T03356
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paea
Paenibacillus sp. FSL R7-0273
Brite
KEGG Orthology (KO) [BR:
paea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paea03032
]
R70723_19665
03400 DNA repair and recombination proteins [BR:
paea03400
]
R70723_19665
Enzymes [BR:
paea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
R70723_19665
DNA replication proteins [BR:
paea03032
]
Prokaryotic type
DNA Topoisomerases
R70723_19665
DNA repair and recombination proteins [BR:
paea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
R70723_19665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_3
Lar_restr_allev
DUF7340
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AIQ47872
UniProt:
A0A089KHI9
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Position
complement(4436259..4438355)
Genome browser
AA seq
698 aa
AA seq
DB search
MADTLVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFSPKYITIRGK
GSILKELKDARKKVKKVYLAADPDREGEAIAWHLAHALDLDNTEECRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDREN
EISAFVPTEYWSITAKLGIKGTDFEAKFHKLNGAKKELGKESDVQEVLEVIKNADFRVAE
VKEKERQRHPSAPFTTSSLQQEAARKLGFRAAKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISTTAQDEAKELILGKYGEKFIPETPRQYSKKAAGAQDAHEAIRPTSALREPELV
KEYMSRDQFRLYKLIWERFVSSQMSSALLDTLSVDITAGTAIFRAVGSKVSFPGFMKVYV
EGNDDGTTDEEKFLPPLKAGDELDKQAIEPKQHFTQPPPRYTEARLVKTMEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELIIEQMEQFFPEILDVEFTAHMEGDLDHVEEG
AEDWVRVLAGFYESFEKRLEFAEEEMKEIEIEDEVSDELCEKCGKPMVYKLGRFGKFLAC
SGFPDCRNTKPIVKDIGVTCPKCNEGKVVERRSKKGRVFYGCDQYPGCDFVSWDRPSIKP
CPACGSWMVEKRNKQGTKLQCTSCDHTEAVLESDELAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacattagtcattgtcgaatcgcctgccaaagcgaagacaatcggcaaatat
ttaggcagtaaatatattgtaaaggcgtctatggggcatatcagagatttgccgaagagt
cagattggcgtagaggtggagaatgacttcagtcccaagtacatcacgatccgcggtaag
ggttcaattctgaaggaacttaaagacgccagaaaaaaagtgaaaaaagtttatctggcg
gctgacccggaccgcgaaggggaagcaattgcctggcatctggcgcatgcgctggatctg
gataacaccgaggagtgccgggttgtttttaacgaaattacgaagcaggcggtcaaggat
gccttcaagactccgcgcaaaatcaatatggatctggttaatgcgcagcaggcccggcgt
attctggaccggctggtaggctataagatcagccctttattatggaagaaagtcaaaaag
ggcctgtcagccggccgggtgcaatcggttgcggttaaaatcataatggaccgtgagaat
gaaatttcggcatttgtcccgactgaatactggagcatcactgcgaagctgggtatcaag
ggcactgattttgaagcgaagtttcataagctgaacggcgcgaaaaaagagctgggtaag
gaaagtgacgtccaggaggttctggaggttatcaagaatgcggacttcagagtagccgag
gtaaaggaaaaggaaagacagcgtcatccttccgcaccgtttacaacaagctcgcttcag
caggaggctgcccgtaagcttggcttccgcgctgccaaaacgatgtccgtggcccagcaa
ttgtatgaaggcgttgagctaggcaaagagggtacagtcggtctgatcacctacatgcgt
actgactcaacacgtatttccacaacggcccaggatgaggcgaaagaactgattctgggt
aagtatggtgaaaaattcattcccgaaacgccccgccagtattccaaaaaagcagcaggg
gcgcaggatgcgcatgaagcgatccgcccgacctctgcactgcgggagcctgaactcgtc
aaggaatacatgagccgggatcaattccgcctgtataagctgatttgggagcgcttcgtc
tccagtcagatgtcctcggcccttctcgataccctctcggtagatattactgcgggaaca
gccatattccgggctgtaggctccaaggtatccttccccggctttatgaaggtttatgtg
gaaggcaacgatgacggaacgacggatgaggagaaattccttccgccgctgaaggctggc
gacgagctcgacaagcaggccattgaacctaagcagcactttacccagccgccgccgcgt
tacacggaagcacgcctggtcaaaacgatggaagagctgggcataggccgtccgagtacg
tatgcccctacactggaaacaatccagaaacgcggctatgtggcgatcgaagagaaaaaa
ttcatgccgacagagctgggcgagctgattatagagcaaatggagcaattcttcccggaa
atccttgatgtggagttcactgctcacatggagggggaccttgaccacgtcgaggaaggg
gcagaggattgggtcagagtgttggccggattctacgaatcctttgagaagcggctggag
tttgccgaggaagaaatgaaggaaattgaaattgaagatgaagtatcggatgagctctgc
gagaaatgcggcaaacctatggtgtataagcttggccggttcggcaagttcctggcctgc
tccggcttcccggactgccgtaataccaagccgattgtaaaggacattggggttacctgt
cctaagtgtaacgaaggcaaggtcgtggagcgccgcagtaaaaaaggacgggtgttctat
gggtgtgaccagtaccctggctgtgattttgtttcctgggaccgtccgtccattaaacca
tgtcctgcttgcggatcgtggatggtggaaaagcgcaacaagcaaggaaccaagctgcaa
tgcacttcctgtgatcacacggaagcagtgcttgaaagcgatgaattagcagaataa
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