Pseudomonas aeruginosa NCGM 1900: NCGM1900_0079
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Entry
NCGM1900_0079 CDS
T03789
Name
(GenBank) hypothetical protein
KO
K11902
type VI secretion system protein ImpA
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM1900_0079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paeb02044
]
NCGM1900_0079
Secretion system [BR:
paeb02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCGM1900_0079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
BAP19214
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All DBs
Position
104055..105089
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AA seq
344 aa
AA seq
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MLDVPVLLAAVSPDSPCGDDLEYDAAFLELERIAQGQPERQMGDAVLPAEPPEWPRVRAL
ASELFGRSKDLRVANLLLQSNVALDGLDGLAEGLLLVRELLGQYWDGVYPLLDADDDNDP
TFRINALTGLVAEPLLQLVWAIPLVRSRAFGPVNLRAALNAAGLQRFASETLSPEQIAGA
FADADADALAATRRALDGAQEHALAIESGVAERVGSAQGLDLGPLRQLLRQALQVFDLYG
PQGAGESLAPGAEAVADEQVGAAPVAAVAAPAPRASGEIANREDVLRQLDRLLEYYVRHE
PSSPVPVLLKRAKTLVTADFAEIVRNLIPDGISQFETLRGPESE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatgtacccgttttgctggccgccgtatccccggactcgccctgtggcgacgat
ctggagtacgacgccgcgttcctcgaactcgaacgcatcgcccagggccaacccgagcgc
cagatgggcgatgccgtgctgcccgccgagccgccggagtggccgcgcgtacgcgcgctg
gccagcgaactgttcggccgtagcaaggacctgcgggtagccaacctgctgctgcagagc
aacgtcgccctcgacggcctggacgggctcgccgaaggcctgctgctggtccgcgagctg
ctcggccagtactgggacggcgtctatccgttgctcgacgccgatgacgacaacgacccc
accttccgtatcaacgccctcaccggcctggtcgccgaaccgctgctgcaactggtctgg
gcgatcccgctggtgcgctcgcgggcgttcggcccggtcaacctgcgcgccgcgctgaac
gccgccgggctgcaacgcttcgccagcgagaccctgagtcccgagcagatcgccggcgcc
ttcgccgatgccgacgccgatgcgctggccgccacccggcgcgccctggatggcgcccag
gaacatgccctggccatcgagagcggcgtcgccgaacgggtcggctcggcccagggactc
gacctcggtccccttcgtcaactgctgcgccaggccctccaggtgttcgacctgtacggc
ccgcagggcgccggcgagtccttggcgccgggtgccgaggcggtcgccgacgagcaggtg
ggtgccgcgcctgtcgcagccgtcgccgcgccggcaccgcgagccagcggcgagatcgcc
aaccgcgaagacgtcctgcgccagctcgatcgcctgctcgagtattacgttcgccacgag
ccgtcgagtccggtgccggtgctgctcaagcgcgccaagacactggtgacggccgacttc
gccgaaatcgtgaggaatctcatccccgatgggatttcccagttcgaaaccctgcgaggc
ccggaaagcgagtaa
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