Pseudomonas aeruginosa NCGM 1900: NCGM1900_0080
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Entry
NCGM1900_0080 CDS
T03789
Name
(GenBank) hypothetical protein
KO
K11901
type VI secretion system protein ImpB
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM1900_0080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paeb02044
]
NCGM1900_0080
Secretion system [BR:
paeb02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCGM1900_0080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
Herpes_UL69
Motif
Other DBs
NCBI-ProteinID:
BAP19215
UniProt:
A0A072ZG09
LinkDB
All DBs
Position
105178..105696
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AA seq
172 aa
AA seq
DB search
MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADR
KFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLN
KLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcactaccagcagtcagaagttcatcgccaggaaccgggcgccacgcgtgcag
atcgagtacgacgtggagctgtacggtgccgagaagaaggtccagctgcccttcgtcatg
ggcgtcatggccgacctcgccggcaagcccgccgaaccccaggcggcggtcgccgaccgc
aagttcctggagatcgacgtggacaacttcgatgcccggctgaaggcgatgaagccgcgg
gtggccttcaacgtaccgaacgtgctgaccggcgaaggcaacctgagcctggacatcacc
ttcgagagcatggacgacttcagccccgccgcggtggcgcgcaaggtcgattcgctgaac
aagctgctcgaggcgcgtacccaactggccaacctgctgacctacatggacggcaagacc
ggcgccgaggaaatgatcatgaaggcgatcaaggacccggccctgcttcaggccctggcc
agcgcgccgaagcccaaagacgacgagccgcaggcgtaa
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