Pseudomonas aeruginosa NCGM 1900: NCGM1900_0423
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Entry
NCGM1900_0423 CDS
T03789
Symbol
chpD
Name
(GenBank) putative transcriptional regulator
KO
K06599
AraC family transcriptional regulator, chemosensory pili system protein ChpD
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paeb03000
]
NCGM1900_0423 (chpD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paeb02035
]
NCGM1900_0423 (chpD)
Transcription factors [BR:
paeb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NCGM1900_0423 (chpD)
Bacterial motility proteins [BR:
paeb02035
]
Pilus system
Chemosensory pili system proteins
NCGM1900_0423 (chpD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AraC_binding
HTH_18
HTH_AraC
AraC_binding_2
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
BAP19557
UniProt:
A0AAQ3R1R9
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All DBs
Position
464011..464805
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AA seq
264 aa
AA seq
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MAGLQHARIGASLEVASASLAGHRFEKHSHDEFVISANLCGLEDVWLDGRTFQADSGDLT
LYNPGQIQGGGVRDGQPWRFASLYLPAAELASSLDLSFVEFDRPLLRNPALGRELAASIE
ALLASDRFARERGEERLLEFLGRLLAASGTRLPQRADPGRPAVARLQALLAERLAEPPDL
DGMAEQVGLSKYHLLRAFKKATGLSPRQWSMQLRTRRALGLLRRGLAVGEVAHALGFADQ
SHLTRYFTSAYGISPGRYQRAVRG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgcaacacgcgcggatcggcgcctccctcgaggtcgccagcgccagcctg
gccgggcaccgcttcgagaagcacagccacgacgagttcgtcatcagcgccaacctctgc
ggattggaagatgtctggctggatggccgtaccttccaggccgacagcggcgacctgacc
ctctacaacccggggcagatccagggcggcggcgtccgcgacggccagccctggcgcttc
gccagcctctatctgcctgccgccgaactggcgagcagcctggatctttccttcgtcgag
ttcgaccgcccgctgctgcgcaatccggcgctgggccgcgagttggccgccagcatcgaa
gccttgctggccagcgaccgcttcgcccgcgaacggggcgaggagcgcctgctggagttc
ctcggccgcctgctggcggcgagcggcacccgcctgccgcagagggccgatcctgggcgc
ccggctgtcgcccgcctgcaggcgctgctcgccgagcgcctggccgagccgccggacctg
gatgggatggcggagcaggtgggcctgtcgaaataccacctgctgcgggcgttcaagaag
gccaccgggctcagcccgcgacagtggagcatgcaattgcgcacccgccgcgccctcggc
ctgttacgccgtggcctggcggtgggcgaggtggcccacgccctgggcttcgccgaccag
agccacctgacccgttacttcaccagcgcctacggcatttcgccgggccgctaccagcgc
gccgtgcgcggctga
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