Pseudomonas aeruginosa NCGM 1900: NCGM1900_0973
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Entry
NCGM1900_0973 CDS
T03789
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03030
DNA replication
paeb03430
Mismatch repair
paeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCGM1900_0973 (holA)
03430 Mismatch repair
NCGM1900_0973 (holA)
03440 Homologous recombination
NCGM1900_0973 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paeb03032
]
NCGM1900_0973 (holA)
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_0973 (holA)
Enzymes [BR:
paeb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCGM1900_0973 (holA)
DNA replication proteins [BR:
paeb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCGM1900_0973 (holA)
DNA repair and recombination proteins [BR:
paeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCGM1900_0973 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BAP20097
UniProt:
A0A069Q2Z6
LinkDB
All DBs
Position
complement(1017347..1018384)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLTPAQLAKHLQGPLAPVYVVSGDEPLLCQEACDAIRQACRERDFGERQVFNAEANFDW
GLLLEAGASLSLFAEKRLIELRLPSGKPGDKGAAILQEYLQRPPEDTVLLLSLPKLDGST
QKTKWAKALIDGNAAQFIQVWPVDVHQLPQWIRQRLSQAGLSASPEALELIAARVEGNLL
AAAQEIEKLKLLAEGNQIDAATVQAAVADSARFDVFGLIDAALGGEAAHALRILEGLRGE
GIEPPVILWGLAREIRLLAGLSQQYGQGIPLEKAFAQARPPVWDKRRPLLTRALQRHSSS
RWNQMLRDAQLIDAQIKGQAPGSPWSGLSLLALSLAGQRLGLPAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgactcccgcgcaactcgccaagcacctccagggccccctggcgcccgtctat
gtcgtcagcggcgatgaaccgctgctctgccaggaagcctgcgatgccattcgccaggcc
tgccgcgagcgcgacttcggcgagcgccaggtattcaatgccgaagccaacttcgattgg
ggcctgctgctggaggccggcgccagcctgtcgctgttcgccgagaagcgcctgatcgaa
ctgcgcctgccctccggcaagcccggcgacaaaggcgcggcgattctccaggaatacctg
caacggccgccggaagacaccgtgctcctgctcagcctgcccaagctcgatggcagcacg
cagaagaccaagtgggccaaggccctgatcgatggcaacgccgcgcagttcatccaggtc
tggccggtcgacgtccaccagttgccgcagtggattcgccagcgcctgtcccaggccggc
ctgtccgccagccccgaagccctggagctgatcgccgcgcgcgtggaaggcaacctgctc
gccgccgcccaggaaatcgaaaagctcaagctgctcgccgagggcaaccagatcgacgcc
gccaccgtacaggccgcggtcgccgacagcgcacgcttcgatgtcttcggcctgatcgac
gctgcccttggcggtgaagcggcccacgccctgcgcatcctggaaggactgcgcggcgaa
ggcatcgagccgccggtgatcctctggggcctggcccgcgagatccgcctgctggctggt
ctgtcccagcaatacggccagggcatcccgctggagaaagccttcgcccaggcgcgtccg
ccggtctgggacaagcgccgtccgctgctgacccgtgccctgcaacgccactccagcagc
cgctggaaccagatgctgcgggatgcccagttgatcgacgcgcagatcaagggacaggca
cccggcagcccctggagcggtctctcgcttctcgccctgagcctcgccggccagcgtctc
ggcctgccggcagcctga
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