Pseudomonas aeruginosa NCGM 1900: NCGM1900_2110
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Entry
NCGM1900_2110 CDS
T03789
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCGM1900_2110 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_2110 (recC)
Enzymes [BR:
paeb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCGM1900_2110 (recC)
DNA repair and recombination proteins [BR:
paeb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCGM1900_2110 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BAP21217
LinkDB
All DBs
Position
complement(2180106..2183579)
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AA seq
1157 aa
AA seq
DB search
MIVHGNRLDDLRDLAVSWMRRYPLAPLESERVLVHSNGIAQWLKLALAEDPREDGGGGGG
IAAALEVQLPAQFLWQAYRAVLGRESIPEVSELDKAPLTWRLMRLLPGLLERPEFRTLQR
FLADDADLRKRHQLAERLADLFDQYQVYRGDWLDDWSQGRDQLRTANGQARPLGADERWQ
AELWRALLADVGADSLARSRSGVHRRFIEALRFASAAPRALPRRVVVFGISSMPAQTLEA
LAALARFSQVLLCVHNPCRHHWADIVADKDLLRHEYRRQQRRAGVPADLDEDRQHQHAQP
LLAAWGKQGRDYINLLDSYDDPDSYRNLFGEVNGGRIDLFSEEAPHGLLGQLQDDILELR
PLAETREHWPPVAPRSDASIRFHVAHSAQREVEILHDQLLARFNADPSLKPRDVIVMVPD
INAYAPHIEAVFGQVPRDDQRFIPYTLADQGQRGREPLLIALEHLLKLPDSRFAVSEILD
LLDVPALRRRFGVDEADLATLHRWIEGAGVRWGLDAAQRERLGLPAGLEGNSWRFGLRRM
LLGYAVGEGAALQGIQPYDEVGGLDAALAGPLAVLLERLEVAYAELAEPATPAQWGERLQ
ALLTVFFEAPDERDELLLTQLLQLLERWQEHCACAAFAEPLPISVIREAWLGGLDQGGLN
QRFLAGAVSFCTLMPMRAIPFRLVCLLGMNDGDYPRQQSPLDFDLMRNDYRPGDRSRRED
DRYLLLEALLSAREQLYVSWVGRSIRDNGERPPSVLIGQLRDHLAAGWRLDSDGDGEALL
RALTQEHPLQPFSRRYFHDAPEQGVDGLFTYAREWREVHREDEIGAPDAEAPLPPLELEG
ALGLRALAEFLANPVNAFFQQRLKVRFDDEQLTGNDEEPFELDALDNWKLQFELTERMKR
WVERDWDAEGLPVQLQAQVERLRRQGRLPLAAFGEFSARHLLQPLPDLLWRYRQEIERWP
EAVEQQQELRHRHPSGLELEDWLGGLRRDASGRLARLQLLSGKLHEGRSFKWHSLVRHWL
QHLALQRLGQPVRSVLVSQTGTLEIPPLPSERAGEYLDQLIDAWRQGMRQPLPLACRTAF
AWLASGGAAEPEKAMREARKRYEGGFGMGGEVDASPALARVYPDFDRLLASGEFAHWAEQ
LYAPLLAALGRGAEEQA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccacggcaatcgcctggacgacctgcgcgacctcgccgtttcctggatgcgc
cgctatccgctggcgccgctggaaagcgagcgggtcctggtgcacagcaacggcatcgcc
caatggttgaagctggcattggccgaagatccccgcgaggacggcggcggcggtggcggc
atcgccgcggcgctggaggtgcagttgccggcgcagttcctctggcaggcctatcgcgcg
gtgctgggccgcgaaagcattcccgaggtttccgaactggacaaggcgccgctgacctgg
cgcctgatgcgtctgcttcccggattgctggagcgtcccgagttccgcaccctgcaacgt
ttcctcgccgacgatgccgacctgcgcaagcgtcatcaactggccgagcgcctggccgac
ctgttcgaccagtaccaggtctatcgcggcgactggctcgacgactggagccagggccgc
gaccagttgcgcacggcgaacgggcaggcgcgcccgctcggtgccgacgagcgctggcag
gccgaattgtggcgcgcgctgctcgccgacgtcggtgccgatagcctggcccgcagccgc
tccggcgtgcaccggcgcttcatcgaggcgctgcgcttcgccagcgcggcgccgcgcgcg
ttgccgcgacgagtggtggtgttcgggatttcctcgatgccggcgcagaccctcgaggcg
ctggccgccctggccaggttcagccaggtgctgctctgcgtgcacaacccctgtcgccac
cactgggccgacatcgtcgccgacaaggacctgttgcgccacgagtaccgccgccagcag
cgccgcgccggcgtccccgccgacctcgacgaggaccgccagcaccagcatgcccagccg
ttgctggcggcctggggcaagcagggccgcgactacatcaacctgctcgacagctacgac
gacccggacagctatcggaacctgttcggcgaggtcaacggcgggcgcatcgacctgttc
agcgaggaggccccgcacgggctgctcggccagttgcaggacgatatcctcgaactgcgc
ccgttggcggaaacccgcgagcactggccgccggtggcgccgcggagcgacgcctcgatc
cgcttccatgtggcccacagcgcgcagcgcgaagtggagatcctccacgaccagttgctc
gcccgcttcaacgccgatccgagcctgaagccgcgcgacgtgatcgtcatggtccccgac
atcaacgcctacgcaccgcacatcgaggcggtgttcggccaggtgccgcgcgacgaccag
cgcttcattccctataccctggccgaccagggacagcgcggtcgcgagccgctgctgatc
gccctggagcacctgctgaaactgcccgacagccgtttcgccgtgagcgagatcctcgac
ctgctggacgtcccggcattgcgccggcgtttcggcgtcgacgaggccgacctggcgacc
ctgcaccgctggatcgaaggcgccggcgtgcgctgggggctggatgccgcgcagcgcgag
cgtctcggcctgccagcgggactggagggcaacagttggcgcttcggtctgcggcgcatg
ctgctcggctacgcggtcggcgaaggcgcggccctgcaaggcatccagccctacgatgag
gtcggtggcctggacgccgccctggcaggcccgctggctgtgctgctggagcgcctcgag
gtggcctacgcggagctggccgaaccggccaccccggcgcagtggggcgagcgcctgcag
gccctgctcacggtgttcttcgaggcccccgacgagcgcgacgaactgctcctcacccag
ctcctgcaactgctcgagcgctggcaggaacactgcgcctgtgcggccttcgccgagccg
ctgccgatcagcgtgatacgcgaggcctggctcggcggcctggaccagggcggcctgaac
cagcgcttcctggctggcgcggtgagtttctgcacgttgatgccgatgcgcgcgatcccg
ttccggctggtctgcctgcttggcatgaacgatggcgactacccccgccagcagtcgccg
ctggatttcgacctgatgcgcaacgactaccgccccggcgaccgctcgcggcgcgaggac
gaccgctacctgctgctcgaggcgctgctctcggcgcgcgagcaactctacgtgagttgg
gtggggcggagtatccgcgacaatggcgagcggccgccctcggtgctgatcggccagttg
cgcgatcacctggcggccggctggcgcctggactcggacggcgacggcgaggcgctgctg
cgtgccctgacccaggagcatccgctgcagccgttcagccgccggtattttcacgatgcg
ccggagcagggcgtcgatggcctgttcacctacgcccgcgagtggcgcgaggtccatcgc
gaggacgagatcggcgctcccgacgccgaagcgcccctgccgccgctggagctggagggc
gcgctggggctgcgagcgctggcggagttcctcgccaacccggtgaatgcgttcttccag
cagcggctcaaggtgcgcttcgacgacgagcaattgaccggcaacgacgaagagcctttc
gaactggacgcgctggacaactggaagctgcaattcgagctgaccgaacgcatgaagcgc
tgggtcgagcgagactgggatgccgagggcctgccggtgcagttgcaggcccaggtcgag
cgactgcggcgacagggtcgcctgccgctggcggcgttcggcgagttctccgcgcgccat
ttgctgcaaccgctgcccgacctgctctggcgctaccgccaggaaatcgagcgctggccg
gaggcggtcgagcagcagcaggagttgcgccatcgccatccgtccgggctggagctggag
gactggctcggcggcttgcgtcgcgacgcttccgggcgcctggcgcgcctgcaattgctc
agcggcaagctccatgaggggcgcagcttcaagtggcacagcctggtacgccactggttg
cagcacctcgccctgcaacgtctcggccagccggtgcgcagcgtgctggtgagccagacc
ggcaccctggagattccgccgctgccgagcgagcgcgccggcgagtacctcgaccagttg
atcgacgcctggcgccagggcatgcgccagccgttgccgctggcctgccggaccgctttc
gcctggctcgccagtggtggcgccgcagagcccgagaaagccatgcgcgaggcgcgcaag
cgctacgagggagggttcggcatggggggcgaggtggacgcctcgccggcgctggctcgg
gtctatccggacttcgaccggctgctcgccagcggtgagttcgcgcactgggccgagcag
ctctacgcgccgctgctggctgccctggggcgtggcgcggaggagcaggcatga
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