Pseudomonas aeruginosa NCGM 1900: NCGM1900_2308
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Entry
NCGM1900_2308 CDS
T03789
Symbol
cafA
Name
(GenBank) cytoplasmic axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeb03019
]
NCGM1900_2308 (cafA)
03009 Ribosome biogenesis [BR:
paeb03009
]
NCGM1900_2308 (cafA)
Messenger RNA biogenesis [BR:
paeb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCGM1900_2308 (cafA)
Ribosome biogenesis [BR:
paeb03009
]
Prokaryotic type
rRNA processing factors
NCGM1900_2308 (cafA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BAP21415
UniProt:
A0A069PXR8
LinkDB
All DBs
Position
complement(2383550..2385007)
Genome browser
AA seq
485 aa
AA seq
DB search
MSEEILINITPMESRVAVVENGVLQEVHVERTQRRGIVGNIYKGRVVRVLPGMQAAFVDI
GLERAAFIHAAEISNREGSAVESISALVHEGQALVVQVTKDPIGTKGARLTTHLSIPSRY
LVYMPRTSHVGISLRIEDEVERERLKKVVADCVAAEGIEGQGGFILRTAAEGAGEDEILA
DIRYLRRLWDQIAAQIQTVGAPSVIYEDLSLAIRTLRDLVNPRIEKIRIDSRENFQKITS
FVEELMPEISDRLEHYPGERPIFDLYGVEDEIQKALERKVLLKSGGYLIVDPTEAMTTID
VNTGAFVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMEDEEHRRQVLRTL
EKQLERDHAKTNIIGITELGLVQMTRKRTRESLVQILCEPCPCCQGRGMLKTAETTCYEI
FREILREARAYQADSYLVLANQKVVDRLLDEESGNVADLEAFIGRTIKFQVEAMYSQEQY
DVVLL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagagatcctgatcaatatcacgccgatggagtcgcgcgtggcggtggtggaa
aacggcgtcctgcaggaagtgcatgtcgaacgcacccagcggcgcggcatcgtcggcaat
atctacaaggggcgggtggtacgggtactgccggggatgcaggcggcgttcgtcgacatc
ggcctggaacgtgcggcgttcatccatgccgccgagatatccaatcgcgaaggcagcgcc
gtggaaagcatcagtgccctggtccatgaggggcaggcgctggtggtgcaggtgaccaag
gatccgatcggcaccaagggcgcacggctgaccacccacctgtcgattccttcgcgctat
ctggtgtacatgccgcgcaccagccatgtcgggatatccctgcggatcgaggacgaagtc
gagcgcgagcgcctgaagaaggtggtggccgactgcgtggcggcggaaggcatcgagggg
cagggcggcttcatcctgcgcaccgctgcggaaggtgcgggcgaggacgagattctcgcc
gacatccgctaccttcgccggctatgggaccagatcgccgcgcagatccagaccgtcggc
gcgccttcggtgatctacgaagacctgtccctggcgatccgtaccctgcgcgacctggtg
aacccgcggatcgagaagatccgcatcgactcgcgagagaacttccagaagatcacttcc
ttcgtcgaagaattgatgccggagatttccgatcgcctcgaacattacccgggcgagcga
ccgatcttcgatctctacggcgtcgaggacgaaatccagaaagccctggagcgcaaggta
ctgctgaagtccggcggctacctgatcgtcgatccgaccgaggcgatgaccaccatcgac
gtgaacaccggcgccttcgtcggccatcgcaacctcgaggaaaccatcttcaagaccaac
ctcgaggcggccaccgcgatcgcccgccaactgcgcctgcgcaacctgggcgggatcatc
atcatcgacttcatcgacatggaggacgaggagcatcgccggcaggtcctgcgcaccctg
gagaagcaactggagcgcgaccacgcgaagaccaacatcatcggcatcaccgagttgggc
ctggtgcagatgactcgcaagcgcacccgcgaaagcctggtgcagatcctctgcgagccg
tgcccctgctgccagggacgcggcatgctgaagactgcggaaaccacctgctacgagatt
ttccgcgagattctccgcgaggcgcgtgcctaccaggccgactcctacctggtgctggcc
aaccagaaggtggtggaccggctgctcgacgaggagtcgggtaacgtcgccgatctcgag
gcgttcatcggccgcaccatcaagttccaggtcgaggcgatgtactcgcaggagcaatat
gacgtggtcctgctctga
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