Pseudomonas aeruginosa NCGM 1900: NCGM1900_2444
Help
Entry
NCGM1900_2444 CDS
T03789
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00260
Glycine, serine and threonine metabolism
paeb00460
Cyanoamino acid metabolism
paeb00630
Glyoxylate and dicarboxylate metabolism
paeb00670
One carbon pool by folate
paeb00680
Methane metabolism
paeb01100
Metabolic pathways
paeb01110
Biosynthesis of secondary metabolites
paeb01120
Microbial metabolism in diverse environments
paeb01200
Carbon metabolism
paeb01230
Biosynthesis of amino acids
paeb01240
Biosynthesis of cofactors
paeb04981
Folate transport and metabolism
Module
paeb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NCGM1900_2444 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NCGM1900_2444 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCGM1900_2444 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NCGM1900_2444 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NCGM1900_2444 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NCGM1900_2444 (glyA)
Enzymes [BR:
paeb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NCGM1900_2444 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BAP21546
UniProt:
A0A072ZDV8
LinkDB
All DBs
Position
2536064..2537317
Genome browser
AA seq
417 aa
AA seq
DB search
MFSRDLTLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
HKRYYGGCEYVDIVEQLAIDRAKQLFGADYANVQPHAGSQANAAVYLALLSAGDTILGMS
LAHGGHLTHGASVSSSGKLYNAVQYGIDANGLIDYDEVERLAVEHKPKMIVAGFSAYSQV
LDFARFRAIADKVGAYLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARANEEIEKKLNSAVFPGAQGGPLEHVIAAKAVCFKEALQPEFKTYQQQVLKNAQSMAQV
FLDRGFDVVSGGTQNHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEAECRELAGWICDILENMGDESVVDGVREKVKAICAKFPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaccctcgcccgctacgatgccgaactctttgccgcgatggag
caggaagcccagcgccaggaagagcacatcgagctgatcgcctccgagaactacaccagc
ccggcggtgatggaagcccagggttcggtgctgaccaacaagtacgccgaaggttatccg
cacaagcgctactacggcggctgcgagtacgtcgatatcgtcgagcaactggccatcgac
cgcgccaagcaactgttcggcgccgattacgccaacgtccagccgcacgccggctcccag
gccaacgccgcggtctacctggccctgctgtcggccggcgacaccatcctcggcatgagc
ctggcccatggcggccacctgacccacggcgccagcgtctcctcctccggcaagctgtac
aacgccgtgcagtacggcatcgacgccaatggcctgatcgactacgacgaagtcgagcgc
ctggccgtggagcacaagccgaagatgatcgtcgccggcttctccgcctattcccaggtc
ctcgatttcgcccgcttccgcgccatcgcagacaaggtcggcgcctacctgttcgtcgac
atggcccacgtcgccggcctggtcgccgctggcgtctacccgaacccggtgccgttcgcc
gacgtggtcaccaccaccacccacaagaccctgcgcggtccgcgcggtggcctgatcctg
gcgcgcgccaacgaggagatcgagaagaagctcaactccgcggtattccccggcgcccag
ggcggtccactggagcacgtgatcgcggccaaggcggtgtgcttcaaggaagccctgcag
ccggagttcaagacctaccagcagcaggtcctgaagaacgcccagagcatggcccaggtc
ttcctcgaccgcggtttcgacgtggtttccggcggcacccagaaccacctgttcctgctc
tccctgatcaagcaggacatcaccggcaaagacgccgacgccgccctcggccgcgcgttc
atcaccgtgaacaagaactcggtcccgaacgacccgcgctcgccgttcgtcacctccggc
ctgcgcatcggtaccccggccgtgaccacccgcggcttcaaggaagccgagtgccgcgag
ctggccggctggatctgcgacatcctcgagaacatgggcgacgagtccgtggtcgacggc
gtacgcgagaaggtcaaggcgatctgcgccaagttcccggtctacggcaactaa
DBGET
integrated database retrieval system