KEGG   Pseudomonas aeruginosa NCGM 1900: NCGM1900_3010
Entry
NCGM1900_3010     CDS       T03789                                 
Symbol
lhr1
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paeb  Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:paeb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paeb03400]
    NCGM1900_3010 (lhr1)
Enzymes [BR:paeb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     NCGM1900_3010 (lhr1)
    5.6.2.6  RNA 3'-5' helicase
     NCGM1900_3010 (lhr1)
DNA repair and recombination proteins [BR:paeb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    NCGM1900_3010 (lhr1)
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C WHD_2nd_Lhr Cas3-like_C_2 ResIII AAA_25 PhoH
Other DBs
NCBI-ProteinID: BAP22111
UniProt: A0AAQ3LSZ9
LinkDB
Position
3125650..3129996
AA seq 1448 aa
MPISSSSARRAEPAPRPLAEFHPVVRQWFERHFAAPTPAQVEAWPAIREGLSTLVAAPTG
SGKTLTAFLAAIDALVVEGLAAGGELADATQVVYVSPLKALSNDIRINLEQPLAGIREEL
ARLGLPDVDIRSAVRTGDTPQVERGAMRKRPPHILVTTPESLYILLGSESGRQMLAGVRS
VIVDEIHALAGSKRGSHLALSLERLQALCPRPLLRIGLSATQKPIEKVARFLVGASGNPR
DPACRIVDIGYTRPRDLGIEVPPVALEAVMSNDTWELVYDRLAHLAGEHRTTLVFVNTRR
MAERVTRFLAERLGSRQVAAHHGSLAKELRLDAEQRLKAGQLKVLVATASLELGIDIGDV
ELVCQLSSPRSIAAFLQRVGRSGHSVGGTPKGRLFPTSRDDLVECAALLDSVRRGELDSL
VLPRQPLDVLAQQIVAEVACQEWREDDLYRLVIRAEPYAGLERERFDEVLRMLAEGYHSR
LGVRGAYLHRDALNGLLRGRRGARLTALTSGGTIPDTGDYSVLLEPQGLLVGTVNEDFAV
ESLAGDVFQLGNTSYRIIRIEPGRVRVEDAQGQPPNIPFWLGEAPGRSDELSASVARLRD
TLDELLGEGQALPEGQRLEPAIAWLGVTLGLDDGAARQIVEYLARARQALGGLPGSRRLV
MERFFDESGGMQLIIHSPHGSRLNRAWGLALRKRFCRSFNFELQAAATEDAIILSLSTSH
SFPLDEVWRYLHSASAEHLLVQAVLDAPLFGVRWRWNLTTSLGLPRYAGGRKVPPQLLRM
KSEDLLASVFPDQVACLENIVGEREVPDHPLVAQTLDDCLHEAMDCDGWLALLRDMESGA
VDLLARDLPAPSALAAEILTARPYAYLDDAPLEERRTQAVQNRRWSDPESADDLGALDLE
AIEAVRGEAWPEARNADEMHEALNSLGYLTSGEAEANPGWGEWLAQLSEQRRAGRLDCAG
SILWLAAERLPAMRLVHPAAKVPDAFQAPRGYPPPDSAEAATVELTRARLGGFGPRTAGQ
LAADLGIGLADQQYALAALEREGYVLRGRFSPGATEEEWCERHLLARIHRYTVKRLRREI
EPVQRADFMRFLFDWQRLAPGTRGRGAESLATVVEQLEGFQAAAAAWESELLAARVADYA
SHWLDQLCRSGRIVWARLAGRSKAAGGPLRSAPIVLLPRRELGLWSVLQRDAPEPELSPR
AARVLEVLREQGASFFDELSQDAHLLRSELENALGELVSVGRVNADSFAGLRTLLMPADK
RSRQERRSRGLPGGMQDAGRWAPLRRAKAEEAGQRLPAEVLEHVARTLLRRYGVVAWRLL
EREVDWLPPWRELLRVYHRLEARGEIRGGRFIAGLAGEQFALAEAVGLLREVRKRPPDGA
MLVVSAVDPLNLVGGLLPGERVPAVTGNRLLYRDGAPLAALVAGKVRMLAEVDGETAQQI
RALLIRRH
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgcctatttcatcctcttccgcccgccgcgccgagccggctccgcggcccctggcggag
ttccatcccgtcgtccgccagtggttcgaacgccacttcgccgcgcccacgccggcgcag
gtggaggcctggccggcgatccgcgaggggctttcgaccctggtcgccgcgcccaccggt
tcgggcaagaccctgaccgccttcctcgccgccatcgatgccctggtggtggaggggctg
gccgccggcggcgagttggcggatgccacccaggtggtctatgtctcgccgctgaaagcg
ctgtccaacgacatccgcatcaacctggagcaaccgctggctggcatccgcgaggaactg
gcgcgtctcggcctgcccgacgtcgatatccgtagcgcggtgcgcaccggcgatacgccg
caggtcgaacgcggagcgatgcgcaagcgcccgccgcacatcctggtcaccacgcccgaa
tcgctgtacatcctgctcggctcggagtcgggccggcagatgcttgccggggtgcgcagc
gtgatcgtcgacgagatccatgccctggccggcagcaagcgcggcagccacctggcgctg
tcgctggagcgcctgcaggcgctgtgtccgcgaccgctgctgcggatcgggctgtccgcc
acgcagaagccgatcgagaaggtcgcgcgcttcctcgtcggcgccagcggcaatccgcgc
gatccggcctgccggatcgtcgacatcggctatacgcgcccccgcgacctgggcatcgag
gtaccgccggtggcgctggaagcggtgatgtccaacgacacctgggagctggtctacgac
cgcctggcgcacctggccggcgagcaccgcaccaccctggtgttcgtcaacacccggcgc
atggccgagcgggtcacccgcttcctcgccgaacgcctcggcagccgccaggtggcggcc
caccacggcagcctggccaaggagctgcgcctggatgccgagcagcgcctcaaggccggg
caattgaaggtactggtggcgaccgcctcgctggagctgggcatcgatatcggcgacgtc
gagctggtctgccagttgtcgtcgccgcgctccatcgccgccttcctgcaacgggtcggg
cgttccgggcacagcgtcggcggcacccccaagggccggttgttcccgacctcccgcgac
gacctggtggaatgcgcggcgctgctcgacagcgtgcgccgtggcgagctggacagcctg
gtgctgccgcgccagccgctggacgtgctggcgcagcagatcgtcgccgaagtggcctgc
caggagtggcgcgaggacgacctctatcgcctggtgatccgcgccgagccctacgccggg
ctggagcgcgagcgcttcgacgaagtcctgcggatgcttgccgagggctaccactcacgc
ctcggcgtgcgcggcgcctatctccatcgcgatgcgctcaacggcctgctccgtggccgc
cgtggcgcgcggctgaccgcgctgacctcgggcgggaccattcccgataccggcgactac
agcgtgctgctggagccgcagggcctgctggtggggacggtcaacgaggatttcgcggtg
gagagcctggccggcgacgtgttccagctgggcaacacctcgtaccggatcatccgcatc
gagccgggacgggtgcgggtcgaggacgcccagggccagccgccgaacattccgttctgg
ctgggcgaggcgccggggcgcagcgacgagctgtcggccagcgtggcgcgcctgcgcgac
accctcgacgagctgctcggcgaaggccaggcattgccggaagggcagcggctggagcca
gccatcgcctggctcggcgtcaccctcgggctggacgatggcgccgcgcggcagatcgtc
gagtacctggcccgcgcccgccaggccctgggtggcctgcccgggagccggcggctggtg
atggaacgcttcttcgacgaatccggcggcatgcaactgatcatccacagtcctcacggc
agccgcctcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgcagcttcaac
ttcgagctgcaggcggcggccaccgaggacgcgatcatcctctcgctgtccaccagccac
agctttcccctcgacgaggtctggcgctacctgcattcggcgagcgccgagcatctgttg
gtacaggccgtgctcgacgcgccgctgttcggcgtgcgctggcgctggaacctgaccact
tcgctcggtttgccgcgctatgccggcggtcgcaaggtgccgccgcaactgctgcggatg
aagagcgaggatctgctggccagcgtgttccccgatcaggtggcgtgcctggagaatatc
gtcggcgagcgcgaggtgcccgatcacccgctggtggcgcagaccctcgacgactgcctg
cacgaggcgatggattgcgacggctggctggccctgctgcgcgacatggagagcggcgcg
gtggacttgctggcgcgcgacctgccggcgccttcggcgttggcggcggagatactcacc
gcgcgtccctacgcctatctcgacgatgcgccgctggaagagcggcgtacccaggcggta
cagaatcgccgctggagcgatcccgagtccgccgacgatctcggcgccctggaccttgag
gcgatcgaggcggtgcgtggcgaggcctggccggaagcgcgcaacgccgacgagatgcat
gaggcgctgaacagcctgggctacctcacctcgggcgaggccgaggccaatccgggctgg
ggggaatggcttgcgcaactgtcggagcaacgccgcgccggacgcctggactgcgcaggc
agcattctctggctggcggcggagcgcctgccggcgatgcgcctggtgcatcccgcggcg
aaggtgcccgacgctttccaggcgcctcgcggctatccgccgccggactcggcggaagcg
gcgaccgtggagctgacccgcgcccgcctgggtggcttcgggccgcgcacggccgggcag
ttggcggccgacctgggcatcggcctggccgaccagcagtacgcgttggccgccctggag
cgcgaaggctatgtgctgcgtggccgcttcagtcctggcgcgacggaagaggagtggtgc
gaacgccatctgctggcgcgcatccatcgctatacggtgaagcgcctgcgccgggaaatc
gagccggtgcagcgcgccgatttcatgcgcttcctgttcgactggcagcgcctggcgccg
ggcacccgtggccggggagcggagtccctggctacggtggtcgagcaactggaaggcttc
caggccgcggcggccgcctgggaaagcgaactgctggcagcgcgggtggccgactacgcc
agccattggctggaccagctgtgccgttccggacgcatcgtctgggcgcgcctggccgga
cgcagcaaggccgccggcggtccgctgcgcagcgcgccgatcgtgctcctgccgcgccgc
gagctggggctctggagcgtcctgcagcgcgacgcgccggagccggaactgtcgccgcgc
gcggccagggtactggaggtgctgcgcgagcagggtgcatcgttcttcgacgaactgagc
caggacgcccacctgctgcgcagcgagctggagaacgccctcggcgagctggtctcggtc
ggccgggtcaacgccgacagcttcgccgggctgcgcaccctgctgatgccggcggacaag
cgcagccgccaggagcgccgctcgcgcggcctgccgggcggcatgcaggacgccgggcgc
tgggcgccgctgcgccgggcgaaggcggaagaggcggggcagcgtttgccggcggaggtt
ctcgaacatgtcgcccggaccttgctgcggcgctatggggtggtcgcctggcgcctgctg
gagcgcgaagtcgactggctgccgccgtggcgcgagttgctgcgcgtctaccatcgcctg
gaagcgcgcggcgagattcgcggcgggcgcttcatcgccggcctggccggcgagcagttc
gccttggcggaagcggtcggcctgttgcgcgaggtgcgcaagcggccgccggatggggcg
atgctggtggtgtcggcagtcgatccgttgaacctggtcggcggcctgctacccggcgaa
cgggtgccggcggtgaccggcaaccgcctgctctatcgagacggagcgccgctggcggcg
ctggtagccggcaaggtgcggatgctcgcggaagtcgacggcgagaccgcgcagcagatc
cgtgcgctgctgatccgccgtcactga

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