Pseudomonas aeruginosa NCGM 1900: NCGM1900_3283
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Entry
NCGM1900_3283 CDS
T03789
Symbol
slt
Name
(GenBank) putative soluble lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paeb01011
]
NCGM1900_3283 (slt)
Enzymes [BR:
paeb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NCGM1900_3283 (slt)
Peptidoglycan biosynthesis and degradation proteins [BR:
paeb01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NCGM1900_3283 (slt)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
Humanin
Motif
Other DBs
NCBI-ProteinID:
BAP22373
UniProt:
A0AAQ3R3B2
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All DBs
Position
complement(3427617..3429545)
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AA seq
642 aa
AA seq
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MRGRLFTLVSCLLLSISSVDAVHAASLTEQRRLYDQAKAALAKGNSAPYMASRSALRDYP
LEPYLAYDELTHRLKTASNEEVERFLTEHGDLPQIGWLKLRWLRLLADRGDWKTFVNYYD
PKLNFTELDCLYGQYQLGHGQKAEGYATSERLWLVGKSQPAACDTLFGLWQGEGQLTEEK
VWKRLKLAAEARNYSLASHLAQRLPTLGNQGALMVSVAQNPAQLSQTGRFSQRDHATADV
VGLGLRRLARQDPEKALSLLDYYSSALPFSSDEKVAIAREIGLSLAKRFDPRALPLMTQY
DPGLRDNTVTEWRTRLLLRLGRWDEAYALTRKLPQDLAATSRWRYWQARSLQLAQPNSKE
PIALYQKLAGERDFYGFLAADRLSVPYKLGNRPAHIDPRVLQRVRNAASTRRAMEFFNRG
EVINARREWYHAARLFDRDELIAQARLAYDMQWYFPAIRSISQAQYWDDLDIRFPMAHRA
TLVREAKNRGLHSSWIFAITRQESAFMSDARSGVGATGLMQLMPGTAKETSRKFGIPLAS
TQQLIVPDVNIRLGAAYLSQVHGQFNGNRVLASAAYNAGPGRVRQWLKDTRHLAFDVWIE
TIPFDETRQYVQNVLSYAVIYGQKLNAPQPIVDWHERYFDDF
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctgttcactctcgtttcctgccttttgctcagtatttcctccgtcgac
gcggtccacgccgcttccctgaccgaacaacgccgtctctacgaccaggccaaggccgcc
ctggccaagggcaacagcgcgccctacatggcctcgcgcagcgccctgcgcgattacccg
ctggaaccctacctggcctatgacgagctgacccaccggctgaagaccgccagcaacgag
gaggtcgagcgcttcctcaccgaacacggcgacctgccgcagatcggctggctgaaactg
cgctggctgcgcctgctggccgaccgcggcgactggaagaccttcgtcaactactacgat
ccgaagctgaacttcaccgaactcgactgcctgtatggccagtaccagctgggccacggc
cagaaggccgaaggttacgccaccagcgaacgcctgtggctggtcggcaagtcgcagccg
gctgcctgcgataccctgttcggcctctggcagggcgaaggccagctcaccgaggaaaag
gtctggaaacgcctcaagctggccgccgaagcgcgcaactacagcctcgcctcgcacctc
gcgcagcgcctgccgaccctcggcaaccagggcgcgctgatggtcagcgtggcgcagaac
cccgcccagctgagccagaccggccgcttcagccagcgcgaccatgccaccgccgacgtg
gtcggtctcggcctgcgccgcctggcgcggcaggacccggaaaaggccctgagcctgctc
gactactacagctcggcgctacccttctccagcgacgagaaggtcgccatcgcccgcgag
atcggtctcagcctggccaagcgcttcgatccgcgtgcactgccgctgatgacccagtac
gatcccggcctgcgcgacaacaccgtcaccgaatggcgcacccgcctgctgctgcgcctg
ggccgctgggacgaagcctacgcgctgacccgcaagctgccccaggatctcgccgccacc
agccgctggcgctattggcaggcacgcagcctgcaactggcacagccgaacagcaaggag
ccgatcgcgctgtaccagaagctcgccggcgagcgcgacttctacggtttcctcgccgcc
gaccgcctgagcgtgccgtacaagctcggcaaccgccctgcgcacatcgacccgcgcgtc
ctgcaacgcgtacgcaacgccgccagcacgcgccgggccatggagttcttcaaccgtggc
gaagtgatcaacgcccgccgcgagtggtaccacgccgcgcgcctgttcgatcgcgacgag
ctgatcgcccaggccaggctggcctacgacatgcagtggtatttcccggcgatccgctcg
atcagccaggcgcagtactgggacgacctggacatccgcttcccgatggcgcatcgcgcc
accctggtgcgcgaagcgaagaaccgcggcctgcactccagttggatcttcgccatcacc
cggcaggaaagcgcgttcatgtccgatgcccgttccggagtcggcgccaccgggctgatg
cagctgatgcccggcaccgccaaggagacctcgcgcaagttcggcatcccgctggcctcg
acccagcaactgatcgtgcccgacgtcaacatccgcctcggcgccgcctacctgagccag
gtgcatggccagttcaacggcaaccgggtactcgcctcggccgcctacaacgccggtccg
ggccgcgtccgccagtggctgaaagatacccgccacctggccttcgacgtgtggatcgag
accattccgttcgacgagactcgccagtacgtgcagaacgtgctgtcctatgcggtgatc
tacgggcagaagctcaatgcgccgcagcccatcgtcgactggcacgaacgctacttcgac
gatttctga
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