KEGG   Pseudomonas aeruginosa NCGM 1900: NCGM1900_3509
Entry
NCGM1900_3509     CDS       T03789                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
paeb  Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paeb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NCGM1900_3509
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paeb03400]
    NCGM1900_3509
DNA repair and recombination proteins [BR:paeb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NCGM1900_3509
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NCGM1900_3509
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd Helicase_C UvrB ResIII DEAD UB2H Flavi_DEAD AAA_30 AAA_22 NPHP3_N P-loop_SecA Cas3-like_C_2
Other DBs
NCBI-ProteinID: BAP22595
LinkDB
Position
3649268..3651244
AA seq 658 aa
MSTGMFILHSNYTPAGDQPEAIARLLSDIEEGATHQTLKGITGSGKTFTMANVIHRLKRP
TLILAPNKTLTAQLYGEMKHFFPENAVEYFVSYYDYFQPEIYMPGTDRFIPKDSAINDHL
ERLRLSTTKSLIERRDVIVVASVSSIYGLGDPDAYRALQIALSPGVKLNQRELIRRLALL
QYDRTERTLKRATFRVQGDVIDIFPADSEHRAVRVELLDDTVASVQWMDPVTGKTLGEID
HYLVSPKTLFAPPTNKIDSASKKILADMEERVDELNRNNRLVEANRLYERITHDVEMMRE
VGYCSGMENYSCYFSDRDAASPPITLLDYLPKDGLLFVDESHVMVPQISAMYRGDQARKD
TLIDYGFRLPSSKNNRPLNFDEFEKVKPQTVFVSATPGEYELRVSKGRVVEQVIRPTGLL
DPKVEVRKADGYIDDLLAEISKCVKRKNRVLVTTLTKVSAEELTDFLTDNGIRARYMHSD
IKAEDRVEIINGLRAGEFDVLIGISLLREGLDIPEASLVAILDADRAGFLRSAHALIQMI
GRVARNENGKAILYADAVTPAMKQAIDETNRRRQLQIAFNEENGISPASSVRKLAGEETN
TEEPTVHSEAFCENLSDLCDQITAKEQQLLEFTDTGDEQRVEDIRRQLDGLYRQFIYI
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgtcaaccggtatgtttattctgcactccaactatacgccggcgggggaccagccagag
gcgatagcgcgcctgctgtcggacatagaagaaggtgcgacgcaccagacgctgaaaggt
atcaccggctcaggtaagaccttcaccatggccaatgtgattcatcgtctgaagcggcct
acgttgatcttggctcctaacaagacgttgaccgcgcagctttatggtgaaatgaagcac
ttctttcctgagaacgcggtcgagtacttcgtttcctactacgattattttcagcccgaa
atctatatgccgggcaccgatcgtttcattccaaaggactcggccatcaatgaccacctt
gagcgcctgcgtctgtccacgaccaaatccttgattgaacgtcgtgacgtgatcgtcgtc
gcttcggtgtcctcaatctacggcctgggtgatccagatgcgtaccgagcgctacagatc
gctctgtcccctggggtcaaactaaaccagagagagctaattcgtcgcttggctttgctg
caatatgatcgcactgagcgcaccctcaagcgcgcaacgttccgcgtccaaggcgatgtg
attgatattttccccgctgattccgagcacagggcggttcgggtggagctgttggatgac
actgttgcgtctgtccaatggatggaccctgttaccggcaagacgttgggagagatagac
cattatttggtttcgccaaaaacgctttttgccccgcccacgaataaaatagattccgca
tccaaaaagatactcgctgatatggaagagcgggttgacgagctgaacaggaataatcgc
ttggtcgaggcaaacaggctgtacgagcggatcacgcatgacgtggaaatgatgcgcgag
gtcggctattgctcggggatggagaattactcctgctatttcagcgaccgagacgcagct
tctcctccgatcacgttgctggattatttgccgaaagacgggctgctgttcgtcgatgaa
tcccatgtcatggtgccacagatatccgcaatgtaccggggggatcaggcgcgcaaggac
acgctgatcgattacgggttccgtttgccttcatcgaagaacaaccggccattgaacttt
gacgagttcgagaaggttaagcctcagaccgtctttgtttccgctactccgggcgaatac
gagctgagggtgtcgaaaggcagggttgtcgaacaggtcatcaggccaacgggactgctt
gaccccaaggttgaagtgcggaaagcggacggatacatagatgacctgcttgccgaaata
tcgaagtgcgtgaagagaaagaatcgagtgcttgtgactacgctgacgaaggtcagtgca
gaagagctaacggatttcttgacggacaacgggattcgagcgcgctacatgcattcggac
ataaaagcggaggatcgtgttgagatcatcaatggcctgcgcgcaggagagttcgatgtt
ttgattgggattagtcttttgcgcgaagggctggatattccagaggcatcattggttgcc
attctcgatgcagaccgtgcaggattcttgcgttcggcccatgcgctcattcagatgatc
ggtcgagtcgctcggaatgagaacggtaaggcgatcttgtacgccgacgcggtgacgccg
gcgatgaaacaggcgatcgatgagaccaataggcgcaggcagcttcaaattgcctttaac
gaggaaaatgggatttctccagcctcgtctgtgcgaaaactagcaggagaagagacgaat
acggaggagcccaccgttcattccgaggctttctgcgagaacttgtccgacctttgcgat
cagatcactgccaaggaacagcagctactcgaatttaccgataccggtgacgagcagcgc
gtcgaagacattcgtcgtcagttggatgggttgtaccggcaattcatttacatctaa

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