Pseudomonas aeruginosa NCGM 1900: NCGM1900_3509
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Entry
NCGM1900_3509 CDS
T03789
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCGM1900_3509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_3509
DNA repair and recombination proteins [BR:
paeb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCGM1900_3509
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCGM1900_3509
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UB2H
Flavi_DEAD
AAA_30
AAA_22
NPHP3_N
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAP22595
LinkDB
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Position
3649268..3651244
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AA seq
658 aa
AA seq
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MSTGMFILHSNYTPAGDQPEAIARLLSDIEEGATHQTLKGITGSGKTFTMANVIHRLKRP
TLILAPNKTLTAQLYGEMKHFFPENAVEYFVSYYDYFQPEIYMPGTDRFIPKDSAINDHL
ERLRLSTTKSLIERRDVIVVASVSSIYGLGDPDAYRALQIALSPGVKLNQRELIRRLALL
QYDRTERTLKRATFRVQGDVIDIFPADSEHRAVRVELLDDTVASVQWMDPVTGKTLGEID
HYLVSPKTLFAPPTNKIDSASKKILADMEERVDELNRNNRLVEANRLYERITHDVEMMRE
VGYCSGMENYSCYFSDRDAASPPITLLDYLPKDGLLFVDESHVMVPQISAMYRGDQARKD
TLIDYGFRLPSSKNNRPLNFDEFEKVKPQTVFVSATPGEYELRVSKGRVVEQVIRPTGLL
DPKVEVRKADGYIDDLLAEISKCVKRKNRVLVTTLTKVSAEELTDFLTDNGIRARYMHSD
IKAEDRVEIINGLRAGEFDVLIGISLLREGLDIPEASLVAILDADRAGFLRSAHALIQMI
GRVARNENGKAILYADAVTPAMKQAIDETNRRRQLQIAFNEENGISPASSVRKLAGEETN
TEEPTVHSEAFCENLSDLCDQITAKEQQLLEFTDTGDEQRVEDIRRQLDGLYRQFIYI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccggtatgtttattctgcactccaactatacgccggcgggggaccagccagag
gcgatagcgcgcctgctgtcggacatagaagaaggtgcgacgcaccagacgctgaaaggt
atcaccggctcaggtaagaccttcaccatggccaatgtgattcatcgtctgaagcggcct
acgttgatcttggctcctaacaagacgttgaccgcgcagctttatggtgaaatgaagcac
ttctttcctgagaacgcggtcgagtacttcgtttcctactacgattattttcagcccgaa
atctatatgccgggcaccgatcgtttcattccaaaggactcggccatcaatgaccacctt
gagcgcctgcgtctgtccacgaccaaatccttgattgaacgtcgtgacgtgatcgtcgtc
gcttcggtgtcctcaatctacggcctgggtgatccagatgcgtaccgagcgctacagatc
gctctgtcccctggggtcaaactaaaccagagagagctaattcgtcgcttggctttgctg
caatatgatcgcactgagcgcaccctcaagcgcgcaacgttccgcgtccaaggcgatgtg
attgatattttccccgctgattccgagcacagggcggttcgggtggagctgttggatgac
actgttgcgtctgtccaatggatggaccctgttaccggcaagacgttgggagagatagac
cattatttggtttcgccaaaaacgctttttgccccgcccacgaataaaatagattccgca
tccaaaaagatactcgctgatatggaagagcgggttgacgagctgaacaggaataatcgc
ttggtcgaggcaaacaggctgtacgagcggatcacgcatgacgtggaaatgatgcgcgag
gtcggctattgctcggggatggagaattactcctgctatttcagcgaccgagacgcagct
tctcctccgatcacgttgctggattatttgccgaaagacgggctgctgttcgtcgatgaa
tcccatgtcatggtgccacagatatccgcaatgtaccggggggatcaggcgcgcaaggac
acgctgatcgattacgggttccgtttgccttcatcgaagaacaaccggccattgaacttt
gacgagttcgagaaggttaagcctcagaccgtctttgtttccgctactccgggcgaatac
gagctgagggtgtcgaaaggcagggttgtcgaacaggtcatcaggccaacgggactgctt
gaccccaaggttgaagtgcggaaagcggacggatacatagatgacctgcttgccgaaata
tcgaagtgcgtgaagagaaagaatcgagtgcttgtgactacgctgacgaaggtcagtgca
gaagagctaacggatttcttgacggacaacgggattcgagcgcgctacatgcattcggac
ataaaagcggaggatcgtgttgagatcatcaatggcctgcgcgcaggagagttcgatgtt
ttgattgggattagtcttttgcgcgaagggctggatattccagaggcatcattggttgcc
attctcgatgcagaccgtgcaggattcttgcgttcggcccatgcgctcattcagatgatc
ggtcgagtcgctcggaatgagaacggtaaggcgatcttgtacgccgacgcggtgacgccg
gcgatgaaacaggcgatcgatgagaccaataggcgcaggcagcttcaaattgcctttaac
gaggaaaatgggatttctccagcctcgtctgtgcgaaaactagcaggagaagagacgaat
acggaggagcccaccgttcattccgaggctttctgcgagaacttgtccgacctttgcgat
cagatcactgccaaggaacagcagctactcgaatttaccgataccggtgacgagcagcgc
gtcgaagacattcgtcgtcagttggatgggttgtaccggcaattcatttacatctaa
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