Pseudomonas aeruginosa NCGM 1900: NCGM1900_3750
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Entry
NCGM1900_3750 CDS
T03789
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCGM1900_3750 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeb03019
]
NCGM1900_3750 (recQ)
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_3750 (recQ)
Enzymes [BR:
paeb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCGM1900_3750 (recQ)
Messenger RNA biogenesis [BR:
paeb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCGM1900_3750 (recQ)
DNA repair and recombination proteins [BR:
paeb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCGM1900_3750 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MarR_2
Pribosyltran
HTH_IclR
LytR_C
Motif
Other DBs
NCBI-ProteinID:
BAP22834
LinkDB
All DBs
Position
3871555..3873762
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AA seq
735 aa
AA seq
DB search
MLVVFLSWADFRYFGHRWVTVSGSLHSSKQLSLWPKMAREGSKVAYDPRRALELLQIGSG
SADANFRDGQEDAIRHIVEGKGRLLVVQKTGWGKSFVYFIATKLLREEGSGPALLISPLL
ALMRNQIAAADRMGVRAATINSDNMDEWTAVEGKLAKGEVDILLISPERLANERFRTQVL
AGIAAQISLLVIDEAHCISDWGHDFRPHYRLLERIVKTLPPNLRLLATTATANNRVMEDL
AAVLGPKLDVSRGDLNRTSLSLQTIRMPSQAERLAWLAEQLSTLQGHGIIYTLTVRDANQ
VAEWLKTQGFNVEAYTGETGDRREQLEQALLNNQVKALVATTALGMGYDKPDLAFVIHYQ
MPGSVVAYYQQVGRAGRALDSAYGVLLSGEEEFDITDWFIRSAFPTRKEVADVLGALEEE
PNGLSVPELLSRVNLSKGRVEKTIALLSLEAPAPIAKQGSKWQLTAAMLSEAFWSRAERL
TALRRDEHQQMQDYVSLPFGEHMGFLIGALDGDPSAVTEPALPPLPISVDAELVKAAVAF
LRRTSLPIEPRKKWPDGGMPQYSIKGFIAPEHQAESGKALCVWGDAGWGGLVRQGKYHDG
HFSDDLVAACVKMIKEWDPQPAPTWLTSVPSLRHPDLVPNFAQRLAAALGLPFHMVISKT
DARPEQKTMANSTQQARNIDGSLALNGQPIPPGPVLLVDDMVDSRWTLTVSAWLLRKSGS
GAVWPMALSQTGHDE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgtttttctgtcttgggctgatttccggtattttggtcaccgttgggtcacc
gttagtggaagtctacatagcagcaagcagttgtcgctttggccgaaaatggcaagggag
ggcagtaaagtggcttacgatccaagacgcgcgttggaattactccaaattggctccgga
agtgccgatgccaatttccgtgacggccaagaagatgccattcgccacatcgttgaaggc
aaaggccgcttgctggtggtgcagaagactgggtggggaaagagcttcgtctatttcatc
gcgaccaagttgctgcgtgaagagggctccggtcctgcactactgatttctccgctgctg
gcgttgatgcgaaaccagatcgccgcagcagatcggatgggcgttcgtgctgccacgatc
aactcagacaacatggacgaatggacggcagtcgagggtaaactagctaagggggaggtc
gacattttgttgatctcgcccgagcgtctggcaaacgagcgcttccgcacccaggttttg
gctggcatcgccgcacagatctccctgctggttatcgacgaagcgcattgcatttccgat
tgggggcatgacttccgcccgcactatcgtctgttggagcgcatcgtcaaaacgctgccg
cccaacctgcgactcctcgctaccacggcgacagcgaacaaccgcgtgatggaggacctt
gctgccgtactcggtccgaagcttgatgtctcgcgtggagacttgaatcggacttcgctt
tccttacagaccatccgcatgcccagccaggctgaacgtcttgcttggctggcagagcaa
ctctctacactgcaaggtcacggcatcatttatacgctgaccgtgcgtgacgccaatcag
gtcgcggaatggctgaagacccaaggcttcaatgtggaagcctacaccggggaaactggt
gatcgccgcgagcagctggaacaggcgctgctcaataaccaggtcaaagcgctggttgcc
actacggcattgggcatgggctatgacaagcccgacctggcgtttgtcattcactatcag
atgccaggctcggtggtcgcctactaccaacaggttggccgcgcggggcgtgcgttggac
tccgcctacggcgtactgctaagcggcgaggaggagttcgacatcacggactggttcatc
cgcagcgccttcccaacccgaaaggaagtggccgatgtcctgggagcgctcgaagaagag
cccaacggcttgtccgtccctgagctgctgagccgagtcaatctgagcaaagggcgcgtc
gagaagacgattgcgctgctctcactcgaagcgccggcccctatcgccaagcaaggcagt
aagtggcagctcacggcggcaatgctgagcgaagcgttttggagtcgcgcggaacgtctc
actgcacttcggcgagacgaacaccagcagatgcaggactacgtcagtctgccgtttggt
gagcacatgggctttctgattggagcactcgacggcgatccaagtgctgtcactgaacca
gccttaccgccactgccaataagcgtggatgctgagctggtcaaagcggccgtcgcattt
cttcgtcgcaccagcttgcccattgagccacgcaagaaatggcccgatggcgggatgccc
cagtacagcatcaagggattcatcgcgcccgagcatcaggccgagtccggcaaagcgcta
tgtgtctggggagacgctggctggggcggcttggttcgacagggcaaataccacgacggt
catttttcagatgaccttgttgctgcctgcgtgaagatgatcaaagagtgggatccgcaa
ccagcgccgacctggttgaccagcgtaccttcgcttcggcatcccgatttggtaccgaat
ttcgcacaacgcttggctgccgcgctgggtctgccgtttcatatggtcatctcgaaaaca
gacgcaaggcccgaacagaaaacgatggcaaacagtacacaacaggcgcgcaacattgat
ggctcgctcgcacttaacggccagcccatcccgcccgggcccgtcctcctggtagatgac
atggttgattcacgctggacgctaacggtgtctgcgtggctgctacgcaagagcggcagt
ggcgcggtttggccgatggccctctcgcagacggggcacgacgaatga
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integrated database retrieval system
