Pseudomonas aeruginosa NCGM 1900: NCGM1900_4171
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Entry
NCGM1900_4171 CDS
T03789
Name
(GenBank) hypothetical protein
KO
K11902
type VI secretion system protein ImpA
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NCGM1900_4171
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paeb02044
]
NCGM1900_4171
Secretion system [BR:
paeb02044
]
Type VI secretion system
Imp/Vas secretion system core components
NCGM1900_4171
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
ANTH
Motif
Other DBs
NCBI-ProteinID:
BAP23251
UniProt:
A0AAQ3QZI9
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All DBs
Position
4400157..4401257
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AA seq
366 aa
AA seq
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MTLPLSGNALSLEVLLEPIDPGQPCGPSLRYDPDYDRLRELRREDDSSLPTGVWQAEAKR
ADWAAVEQLASELLQRRSKDLMLAAWLGEAWLQRGGLGGLQRALVLLAELCERYPEEVHP
QAQDGDQSWRVPPIDWLLRRYAELLHTRLPLMGQGAFAEITLYAWQRLQRQQVASGDSKS
AKAALEAAQLQQKKLDEALRAEPLVQWQRKQASLLACQQQLQRLEQWCDRCLGELAPSCQ
PLREVIAQWLALLKEFIAMHPQAPLPEEQPPVAEADAAEGDADGEESVPASAPSGPAGAP
TSREDAYRQLLLIADYLARTEPHSPVPYLIKRAVEWGNKPLSELLAELINADSEARRVWS
LLGVLP
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcctctttccggcaacgccctgtccctggaagtgctgctcgaaccgatcgac
cccggacagccgtgtggccccagcctgcgctacgacccggactacgaccgcctgcgcgag
ttgcgccgggaggacgacagcagcctgccgaccggcgtctggcaggcggaggccaagcgc
gccgactgggccgcggtggagcagttggccagcgaactgttgcagcggcgcagcaaggac
ctgatgctcgccgcctggctcggcgaggcctggctgcaacgcggcgggctgggcggattg
cagcgcgcgctggtgctgctggcggaactctgcgagcgctaccccgaggaggtgcatccg
caagcccaggacggcgatcagtcgtggcgggtgccgcccatcgactggctgttgcgccgc
tatgccgagctgctgcacacgcgcctgccgctgatggggcagggcgccttcgccgagatc
accctctatgcctggcagaggttgcagcgccagcaggtcgccagcggcgacagcaagagc
gccaaggcggcgctggaagcggcgcaacttcagcagaagaagctcgacgaagcgttgcgc
gcggagcccctggtgcaatggcagcgcaagcaggccagcctgctcgcctgccagcagcaa
ctgcaacgcctggaacagtggtgcgaccgctgcctgggcgaactcgcccccagttgccag
ccgctgcgcgaggtcatcgcgcaatggctggccttgctcaaggagttcatcgccatgcac
ccgcaagcgccgctgcccgaagaacagccaccggtcgcggaggcggacgccgccgaaggc
gacgcggacggcgaggaaagcgtcccggcgagcgcgccgagcgggccggctggcgcgccg
accagtcgcgaggacgcctatcggcaactgctgctgatcgccgactacctggcgcgcacc
gagccgcacagcccggttccctacctgatcaagcgcgcggtggaatggggcaacaagccg
ctgagcgagctgctggcggagctgatcaatgcggactcggaggcgcgccgggtctggtcg
ctgcttggcgtactgccctaa
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