Pseudomonas aeruginosa NCGM 1900: NCGM1900_4625
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Entry
NCGM1900_4625 CDS
T03789
Name
(GenBank) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NCGM1900_4625
09124 Replication and repair
03420 Nucleotide excision repair
NCGM1900_4625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeb03021
]
NCGM1900_4625
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_4625
Enzymes [BR:
paeb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCGM1900_4625
Transcription machinery [BR:
paeb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NCGM1900_4625
DNA repair and recombination proteins [BR:
paeb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NCGM1900_4625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAP23705
LinkDB
All DBs
Position
complement(4911391..4913667)
Genome browser
AA seq
758 aa
AA seq
DB search
MTEQGGEALYQVAVRALCEFSAKRGDLDLRFTPSPSALEGIAGHTLVTSRRPAHYQREVA
LDGRYRHLQVRGRADGYDPQANCLEEIKTHRGDLALQPANHRHLHWAQARVYGWLLCAER
KLEEVELALVYLEVGSQKETRFVERVRADELRLFFESQCQAFLAWAEQELAHRQRRDREL
AALRFPHAEFRHGQRQLAEAVYKAASAGCCLMAQAPTGIGKTIGTLFPQLKAMPGQRLDR
LFFLAAKTPGRALALHALRSLEGETGGLPVRVLELVARDKACEHPDKACHGESCPLAQGF
YERLPAARAAAVEARWLDQARLREVALAHRVCPYYLGQELARWCDLAVGDYNYYFDLGAM
LHGLAQVNQWRVAVLVDEAHNLVERGRRMYSAELDQGDFLGVRKTAPEALRKPLERIQRA
WNELGKTQADDYQAYDEPPQKLLLALQNAVAAINDLLAEQPQALEPALQEFYFAILQFGR
LAELFGEHSLFDIEKRPGRNGRSLARLCLRNVVPAAFLAERFAASRSTVLFSATLGPRDY
YADLLGLPAGTPWLEVDSPFSAEQLEVHIQRRVSTRYAQRQASLAPIAAILGEQFRQRPG
NYLAFFSSFDYLQQTLDVFRQAYPWVPCWSQTRRMDEAERRAFLERFVAGGEGIGFAVLG
GAFGEGIDLPGERLIGAFIATLGLPQVNPVNEQIRLRMQRLFGDGYDYTYLYPGLQKVVQ
AAGRVIRSRSDRGVVHLIDDRFAQARVRRLLPGWWQLR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcagggcggcgaggcgctgtaccaggtggcggtgcgcgcgctttgcgagttc
agcgccaagcgcggcgacctcgacctgcgcttcaccccgtcgcccagcgccctggaaggc
atcgccggacataccctggtgacctcccggcgccccgctcactaccagcgcgaggtggcg
ctggacggacgctaccgtcacttgcaggtgcgcggccgggcggatggctacgatccgcag
gcgaactgcctggaggaaatcaagacccaccgcggcgacctcgccctgcaaccggccaac
caccggcacctgcactgggcccaggccagggtctacggctggctgctctgcgccgaacgg
aagctggaggaagtcgaactggcgctggtctacctggaggtcggcagccagaaggagacc
cgcttcgtcgagcgggtgcgggccgacgagctgcggctgttcttcgagagccagtgccag
gcgtttctcgcctgggccgagcaggaactggcgcaccgccagcggcgcgaccgcgaactg
gccgcgttacgctttccccacgccgaattccgccacggccagcggcaactggcggaggcg
gtgtacaaggccgcctccgccggttgttgcctgatggcccaggcgccgaccgggatcggc
aagaccatcggcacgctgttcccgcaactcaaggcgatgcccgggcagcgcctggaccgg
ctgttcttcctggccgccaagaccccgggccgggccctcgcgctgcatgccctgcgcagc
ctggaaggggagaccggcggactgccggtgcgggtgctggaactggtggcgcgggacaag
gcctgcgagcacccggacaaggcctgccacggcgaatcctgtcccctggcccagggcttc
tacgaacgcctgccggcggcccgcgccgccgccgtggaggcgcgctggctggaccaggcg
cggttgcgcgaggtggcgctggcgcaccgggtctgtccctactacctgggccaggaactg
gcgcgctggtgcgacctggcggtgggcgactacaactactacttcgacctcggcgccatg
ctccatggcctggcccaggtcaaccagtggcgggtggcggtactggtggacgaggcgcac
aacctggtggagcgcggccggcggatgtattccgccgaactcgaccagggcgatttcctc
ggtgtgcgcaagaccgccccggaggccctgaggaaaccgctggagcgcatccagcgtgcc
tggaacgaactgggcaagacccaggcggacgactaccaggcctacgacgagccaccgcag
aagctgctcctggccttgcagaacgcggtggcggcgatcaacgacctgctcgccgagcaa
ccgcaggcgctggagccggcgttgcaggagttctacttcgcgatcctgcagttcggccgt
ctcgccgagctgttcggcgagcattcgctgttcgacatcgagaagcgcccaggccgcaac
ggccgcagcctggcccggctgtgcctgcgcaacgtggtgccggcggcgtttctcgccgag
cgcttcgccgccagccgctccaccgtgctgttctccgctaccctcgggccgcgcgactat
tacgccgacctgcttggcctgccggcgggcacgccctggctggaagtggactcgccattc
agcgccgagcaactggaggtgcacatacagcgtcgggtttccacgcgctatgcgcagcgt
caggcctccctggcgcccatcgcggcgattctcggcgagcagtttcgccagcggccgggc
aactacctggccttcttcagcagcttcgattacttgcagcagacgctggacgtcttccgc
caggcatacccgtgggtgccgtgctggagccagacgcgacggatggacgaggcggagcgc
cgggccttcctcgaacgcttcgtcgcgggcggcgagggcatcggcttcgccgtgctcggc
ggtgccttcggcgaaggcatcgacctgcctggagagcgcctgatcggcgccttcatcgcc
accctcgggttgccccaggtgaatccggtgaacgagcagatccgcctgcgcatgcagcgc
ctgttcggtgacggctacgactacacctacctgtatccgggactgcagaaggtggtccag
gccgccgggagggtgatccgcagccgcagcgatcgcggcgtggtgcacctgatcgacgac
cgtttcgctcaggccagggtacgccggttgctaccgggctggtggcaactgcgttga
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