Pseudomonas aeruginosa NCGM 1900: NCGM1900_4931
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Entry
NCGM1900_4931 CDS
T03789
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paeb03016
]
NCGM1900_4931 (ybbB)
Enzymes [BR:
paeb01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
NCGM1900_4931 (ybbB)
Transfer RNA biogenesis [BR:
paeb03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NCGM1900_4931 (ybbB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_16
AAA_18
Rhodanese
Zeta_toxin
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAP24003
UniProt:
A0A071KZE4
LinkDB
All DBs
Position
complement(5220807..5221916)
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AA seq
369 aa
AA seq
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MRDNTQHYRELFLDDIPLMDVRAPVEYHKGAFPNTVNRPLMNDIERQKVGTSYKQHGQQA
AIALGHELVCGALKAERLAAWKAFAEANPNGYLYCFRGGLRSQIVQQWLKQDAGIDYPRV
IGGYKALRNFLFETTRAAVDECDFVLVGGLTGCGKTEVIAALDNSLDLEGHANHRGSSFG
RRATPQPAQIDFENRLAIDILKKRHRGVGQFVLEDEGRIVGSCSLPLELYQGMQGYPLVW
LEDAFEQRVERILRDYVIDLRSEFERVVGVEEGFAAFSAYLQKSLAGIVKRLGGERYQRL
AAILVQALEEQGRDGSVDTHRGWIEGLLKEYYDPMYAFQRQSKEDRVEFRGNQAEVIGYL
RQRQALRPS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacaacacccagcactaccgcgaactgtttctcgacgatatccccctgatggat
gtgcgcgccccggtggagtaccacaagggcgcctttcccaacacggtcaaccggccgctg
atgaacgacatcgagcggcagaaggtcggcaccagctataagcagcacggccagcaggcc
gccatcgcccttggtcacgaactggtctgcggggcgctcaaggccgaacggctggcggcc
tggaaagccttcgccgaagccaacccgaacggctacctgtattgcttccgcggcggcctg
cgctcgcagatcgtccagcagtggctgaagcaggacgccggcatcgactacccacgggtg
atcggcggctacaaggcgttgcgcaacttccttttcgaaaccacccgcgcggcggtcgac
gagtgcgatttcgtgctggtcggcggcctcaccggttgcggcaagaccgaggtgatcgcg
gcgctggacaacagcctcgatctcgaaggccacgccaaccaccgcggctccagctttggc
cggcgagccacgccgcagccggcgcagatcgacttcgagaaccgcctggccatcgacatc
ctgaagaagcgtcatcgtggcgtcggccagttcgtcctcgaggacgaggggcggatcgtc
ggcagctgctccttgccgctggagctgtaccaggggatgcagggctacccgctggtctgg
ctggaggatgccttcgagcagcgtgtcgagcgtatcctcagggactacgtgatcgacctg
cgcagcgagttcgagcgcgtggtgggcgtggaggagggcttcgccgccttctccgcctac
ctgcagaagagcctcgccggcatcgtcaagcgcctcggcggcgagcgctaccagcggctg
gcggcgatcctcgtgcaggcgctggaagagcagggccgcgacggctcggtggatacccat
cgcggctggatcgaggggctgctcaaggagtactacgacccgatgtacgccttccagcgg
cagagcaaggaagaccgcgtcgagttccgcggcaaccaggccgaggtgatcggctacctg
cgccagcgtcaggcgttgcggccatcgtag
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