Pseudomonas aeruginosa NCGM 1900: NCGM1900_5299
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Entry
NCGM1900_5299 CDS
T03789
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00860
Porphyrin metabolism
paeb01100
Metabolic pathways
paeb01240
Biosynthesis of cofactors
Module
paeb_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NCGM1900_5299 (cobD)
Enzymes [BR:
paeb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NCGM1900_5299 (cobD)
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Motif
Pfam:
CobD_Cbib
AmpE
Motif
Other DBs
NCBI-ProteinID:
BAP24371
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Position
complement(5596254..5597207)
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AA seq
317 aa
AA seq
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MGRASMSALLGILGVALDARFGEPQGWHPLVAFGRLADRLERRFNRSRLAGEGDPGVGWR
SHGVTAWVLAVLPLTLLAWALAELPYLGWLVQALALYAALGLRSLGEHAEPVALALRAGD
LDEARRRVGYLVSRDTRELDQAGVARAATESVLENGSDAVYAALFWFAVAGAPGVVLYRL
SNTLDAMWGYRNARFERFGWAAAKIDDILNYLPARLVALTYALLGGTRQALRCWREQAPQ
WDSPNAGPVMAAGAGALGVSLGGAAIYHGELHQRPLLGSGPQPQGRDIYRALALVRQGVL
LWLLVLAGLWAMGWLHA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttggggcgagcgagcatgagcgcactgctgggtatcctcggcgtggcgctggatgcgcgc
ttcggcgagccgcagggctggcacccgctggtcgccttcggccgcctggccgatcgcctg
gagcgccgtttcaatcgctcgcgcctggccggcgagggcgatcccggggtcggctggcgc
agccacggggtgaccgcttgggtcctcgcggtactgccgctgaccctgctggcctgggcg
ctcgctgaacttccctacctcggctggctggtccaggccctggcgctgtacgccgcgctc
ggcctgcgcagcctcggcgagcacgccgaaccggtggcgctggccttgcgcgccggcgac
ctggacgaggcgcggcgacgtgtcggctacctggtcagccgcgatacccgcgagctggac
caggccggggtcgcccgcgcggccaccgaatcggtactggagaacggcagcgacgcggtc
tacgccgcgctgttctggttcgccgtggccggcgcgccgggggtggtgctgtatcgcctg
agcaataccctggacgcgatgtggggctaccgcaacgcgcgcttcgagcgcttcggctgg
gctgcggcgaagatcgatgacatcctcaactacctgccggcgcggctggtggcgctgacc
tacgcgctgctcggcggcacccgccaggccctgcgctgctggcgcgagcaggcgccgcaa
tgggacagccccaacgccggcccggtgatggccgccggcgccggtgcgctgggcgtgtcc
ctgggcggcgcggcgatctaccacggcgagctgcaccagcggccgctcctcggcagcggc
ccgcagccgcagggccgcgacatctatcgggccctggcgctggtgcgccagggcgtgctg
ctctggctgctggtgctggccggactctgggccatggggtggctgcatgcttga
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