Pseudomonas aeruginosa NCGM 1900: NCGM1900_5370
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Entry
NCGM1900_5370 CDS
T03789
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeb03400
]
NCGM1900_5370 (phr)
Enzymes [BR:
paeb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCGM1900_5370 (phr)
DNA repair and recombination proteins [BR:
paeb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCGM1900_5370 (phr)
Prokaryotic type
NCGM1900_5370 (phr)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP24442
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All DBs
Position
5658747..5660177
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AA seq
476 aa
AA seq
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MNLIWFRCDLRTTDNSALLAAADGRPCVALYLLSPAQWREHDDAPCKVDFWLRNLGELQR
QLAALNIPLLVRDCGHWRQAPEVIGRLCRELGIGAVHVNQEYGVNEERRDQAVGQRLREQ
GVAFHSHLDQLFFAPGSVLTRTGGYFQVFSQFRKVCHERLYQALPGVRPRPQPQPPHALA
SDPLPDAVPAFPRPADSLRRLWPAGEKVAQERLRDFADQHLADYHERRDFPALPGTSQLS
PYLAAGVLSPRQCLDAALVANRGEFSGGQQGAATWINELLWREFYKHILVGYPRVSRHRP
FREETEALRWRQAPAELEAWQQGRTGITIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLL
IDWREGERWFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRLFNPLSQSERFDPRGEFIR
HWLPELAGLERKAIHDPSSLGLFAGVDYPRPMVDLKASRERALAAFRNLPPRDGRA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgatctggtttcgctgcgacctgcgaaccaccgataacagcgcgctcctcgcc
gccgccgatgggcgcccttgcgtggccctctacctgctcagcccggcgcagtggcgggaa
cacgacgatgcgccctgcaaggtcgacttctggctgcgcaacctgggcgagctgcaacgc
cagctcgccgcgctgaacatcccgctgctggtgcgcgactgcggccactggcggcaagcc
ccggaagtcatcggccggctctgccgggagctgggaatcggcgcggtacacgtcaaccag
gaatacggggtgaacgaggaacgccgcgaccaggccgtcggccaacgcctgcgcgaacag
ggcgtggccttccacagccacctcgaccagctgttcttcgcccccggctcggtgctgacc
cgaactggcggctatttccaggtgttcagccagttccgcaaggtctgccacgaacggctc
taccaggccctgccgggtgtccgcccgcgtccgcagccccagccaccgcatgcgctggcc
agcgacccgctgccggatgccgtgcccgccttcccgcggccggccgatagcttgcgccgc
ctctggccggcaggcgaaaaggtagcgcaggaacgcctgcgcgacttcgccgaccagcac
ctggccgactaccatgaacggcgcgacttcccggcgcttcccggcaccagccaactgtcg
ccctacctggccgccggcgtactctcgcccaggcaatgcctggacgccgcgctggtcgcc
aaccgcggcgagttcagcggcggccagcaaggcgccgcgacctggatcaacgagctgctc
tggcgcgagttctacaagcacatcctggtcggctacccacgggtctcccggcaccgcccc
ttccgcgaggagaccgaagccctgcgctggcgccaggccccggcggaactcgaagcctgg
caacaggggcgcaccggcataacgatcatcgacgcggcaatgcgccagttgctcgccacc
ggctggatgcacaatcgcctgcggatggtggtagcgatgttcctcagcaagaacctgctg
atcgactggcgcgaaggcgaacgctggttcatgcgccacctcatcgacggcgacctggcg
gcgaacaacggcggctggcagtggagcgcatccaccggcaccgacgccgtcccctacttc
cgcctgttcaatccgctctcacagtccgaacgcttcgatccacgcggcgagttcatccgc
cactggctgccggaactggccggcctggagcgcaaggcgatccacgatccgtccagcctg
gggctgttcgccggggtcgactatccacggccgatggtcgacctgaaggccagccgcgaa
cgggcgctggcggctttccgcaacctgccgccgcgcgatggtcgcgcgtag
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