Pseudomonas aeruginosa NCGM 1900: NCGM1900_6036
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Entry
NCGM1900_6036 CDS
T03789
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCGM1900_6036 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeb03021
]
NCGM1900_6036 (rho)
03019 Messenger RNA biogenesis [BR:
paeb03019
]
NCGM1900_6036 (rho)
Transcription machinery [BR:
paeb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NCGM1900_6036 (rho)
Messenger RNA biogenesis [BR:
paeb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCGM1900_6036 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
BAP25095
UniProt:
A0ABD7JWT0
LinkDB
All DBs
Position
complement(6384806..6386065)
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AA seq
419 aa
AA seq
DB search
MNLTELKQKPIAELLEMSDAMGLENMARSRKQDIIFALLKKHAKSGEEISGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTIIGKIRPPKEGERYFALLKVDSIN
FDRPENAKNKILFENLTPLFPNERMKMEAGNGSTEDLTGRVIDLCAPIGKGQRGLIVAPP
KAGKTIMLQNIASNITRNNPECHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPPTRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTILATALVETGSKMDEVIYEEFKGTGNMELPLDRKIAEKRVFPAINI
NRSGTRREELLTSEDELQRMWILRKILHPMDEISAIEFLIDKLKQTKTNDEFFDSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccgaactcaagcaaaagccgattgccgaactgctggaaatgtccgatgcc
atgggcctggaaaacatggcccgttcgcgcaagcaggacatcatcttcgccctgctgaag
aagcacgcgaaaagtggtgaagagatctccggcgatggcgtgctggagattcttcaggac
ggcttcggcttcctgcgctccgccgactcttcctacctggccggccccgacgacatctat
gtctcgccgagccagatccggcgcttcaacctgcgcacgggcgacaccatcatcggcaag
atccggccgccgaaagagggcgaacgctacttcgccctgctcaaggtcgactcgatcaac
ttcgatcgtccggagaatgcgaagaacaagattctcttcgagaacctgacgccgttgttc
cccaacgagcggatgaagatggaagccggcaacggctccaccgaagacctgaccggccgc
gtcatcgacctctgcgcgccgatcggcaagggccagcgcggcctgatcgtggcgccgccg
aaggcgggcaagaccatcatgctgcagaacatcgccagcaacatcacccgcaacaacccc
gaatgccacctgatcgtcctgctgatcgacgagcgccctgaggaagtgaccgaaatgcag
cgcaccgtgcgcggcgaagtggtcgcctcgacctttgacgaaccgccgacccgtcacgta
caggtcgccgagatggtgatcgagaaggccaagcgcctggtcgagcacaagaaggacgtg
gtcatcctgctcgactccatcacccgtctggcgcgggcctacaacaccgtgatccccagc
tccggcaaggtgctcaccggcggtgtcgacgcccatgccctggagaagccgaagcgcttc
ttcggcgccgcgcggaacatcgaagagggcggttctcttacgattctcgccacggcgttg
gtggaaaccggctcgaagatggacgaggtgatctacgaggaattcaagggtaccggcaac
atggaactcccattggatcgcaagatcgccgagaagcgcgtgttcccggccatcaacatc
aaccgttcgggtacccgccgcgaagagctgctgaccagcgaggacgagctccagcgcatg
tggatcctgcgcaagatcctgcacccgatggacgagatctccgcgatcgaattcctcatc
gacaagctcaagcagaccaagaccaacgatgagttcttcgattcgatgaaacgaaagtag
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