Pseudomonas aeruginosa NCGM 1900: NCGM1900_6077
Help
Entry
NCGM1900_6077 CDS
T03789
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00300
Lysine biosynthesis
paeb00470
D-Amino acid metabolism
paeb01100
Metabolic pathways
paeb01110
Biosynthesis of secondary metabolites
paeb01120
Microbial metabolism in diverse environments
paeb01230
Biosynthesis of amino acids
Module
paeb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCGM1900_6077 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCGM1900_6077 (lysA)
Enzymes [BR:
paeb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NCGM1900_6077 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAP25136
UniProt:
A0A232D882
LinkDB
All DBs
Position
6427397..6428644
Genome browser
AA seq
415 aa
AA seq
DB search
MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH
CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA
VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL
GVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVQAVRPRDAVPRRYDLVGPICETGDFLAKDRDLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcagttaccgcgacggtgagctgttcgcggaaggggtggcgctttcccgc
atcgccgagcgtttcggcacgcccacctacgtctactcccgcgcgcacatcgaggcccag
taccgcgcctatgccgacgccctcgccggcatgccgcacctggtctgcttcgcggtcaag
gccaactccaacctcggggtgctgaatgtgctggcgcgcctcggcgccggtttcgacatc
gtttcccgcggtgagctggagcgtgtcctggccgccggcggcgatccggccaaggtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggtgtgcac
tgcttcaacgtcgagtccggcgaagagctggagcgcctgcaacgggtggccgcggaactc
ggcgtgaaagcgccggtgtcgctgcgggtcaacccggacgtggatgcccagacccacccc
tatatctccaccggcctgaaagagaacaagttcggcatcgccatcgacgaggccgaggcg
gtctacgcccgcgccgccgagcttgaccacctggaggtgatcggcgtcgactgccacatc
ggctcgcaattgacccagctggagcccttcctcgacgccctcgagcgcctgctcgggctg
gtcgaccgcctggccggcaaaggcatcggcattcgccacctggacctcggcggcggcctc
ggggtgcgctaccgcgacgaacagccgccgctggccggcgactacatccgcgccatccgc
gagcgcctgcatggccgcgacctgaccctggtgttcgagccgggccggtccatcgtcgct
aacgccggcgtgctgctgacccgcgtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggctctctaccaggcctggatg
gacgtgcaggcggtacgcccgcgcgatgccgtgccgcgccgctacgacctggtcgggccg
atctgcgagaccggcgacttcctcgccaaggatcgcgacctggcgctcgccgaaggcgac
ctcctggcggtgcgctcggccggcgcctacggcttcgtcatgagctcgaactacaacacc
cgcggtcgcgccgccgaggtgctggtggatggcgagcagacccacgaggtccgtcgccgc
gagaccgtccaagagctctacgccggcgaaagcctgctgccgcagtga
DBGET
integrated database retrieval system