Pseudomonas aeruginosa NCGM 1900: NCGM1900_6268
Help
Entry
NCGM1900_6268 CDS
T03789
Symbol
soxD
Name
(GenBank) sarcosine oxidase delta subunit
KO
K00304
sarcosine oxidase, subunit delta [EC:
1.5.3.24
1.5.3.1
]
Organism
paeb
Pseudomonas aeruginosa NCGM 1900
Pathway
paeb00260
Glycine, serine and threonine metabolism
paeb01100
Metabolic pathways
Module
paeb_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
paeb00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NCGM1900_6268 (soxD)
Enzymes [BR:
paeb01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
NCGM1900_6268 (soxD)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
NCGM1900_6268 (soxD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SoxD
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
BAP25322
UniProt:
A0A071KUA5
LinkDB
All DBs
Position
6636408..6636728
Genome browser
AA seq
106 aa
AA seq
DB search
MLNIFCPHCGELRSEEEFHAKGQAHIPRPLDPNACSDEEWGDYMFFRDNPRGLHHELWVH
AAGCRKYFNVTRHTVTYEILETYLIGEQPSVVADGEKKPAVQGEPA
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatatcttctgcccccactgcggcgaactgcgttccgaagaggaattccacgcc
aagggtcaggcccacatcccgcgcccgctcgacccgaacgcctgcagcgacgaggaatgg
ggcgactacatgttcttccgcgacaacccgcgcggcctccatcacgagctgtgggtgcac
gccgccggctgccgcaagtacttcaacgtcacccgccatacggtgacctacgagatcctc
gagacctacctgatcggcgagcagcccagcgtcgtcgccgacggtgagaagaaacccgcc
gtacaaggggaaccggcatga
DBGET
integrated database retrieval system