KEGG   Pseudomonas aeruginosa c7447m: M802_3386
Entry
M802_3386         CDS       T03098                                 
Name
(GenBank) DEAD/H associated family protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paec  Pseudomonas aeruginosa c7447m
Brite
KEGG Orthology (KO) [BR:paec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paec03400]
    M802_3386
Enzymes [BR:paec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M802_3386
    5.6.2.6  RNA 3'-5' helicase
     M802_3386
DNA repair and recombination proteins [BR:paec03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M802_3386
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C WHD_2nd_Lhr Cas3-like_C_2 ResIII AAA_25 PhoH
Other DBs
NCBI-ProteinID: AGV65122
LinkDB
Position
complement(3661937..3666283)
AA seq 1448 aa
MPISSSSARRAEPAPRPLAEFHPAVRQWFERHFAAPTPAQVEAWPAIREGLSTLVAAPTG
SGKTLTAFLAAIDALVVEGLAAGGELADATQVVYVSPLKALSNDIRINLEQPLAGIREEL
ARLGLPDVDIRSAVRTGDTPQVERGAMRKRPPHILVTTPESLYILLGSESGRQMLAGVRS
VIVDEIHALAGSKRGSHLALSLERLQALCPRPLLRIGLSATQKPIEKVARFLVGASGNPR
DPACRIVDIGYTRPRDLGIEVPPVALEAVMSNDTWELVYDRLAHLAGEHRTTLVFVNTRR
MAERVTRFLAERLGSRQVAAHHGSLAKELRLDAEQRLKAGQLKVLVATASLELGIDIGDV
ELVCQLSSPRSIAAFLQRVGRSGHSVGGTPKGRLFPTSRDDLVECAALLDSVRRGELDSL
VLPRQPLDVLAQQIVAEVACQEWREDDLYRLVIRAEPYAGLERERFDEVLRMLAEGYHSR
LGVRGAYLHRDALNGLLRGRRGARLTALTSGGTIPDTGDYSVLLEPQGLLVGTVNEDFAV
ESLAGDVFQLGNTSYRIIRIEPGRVRVEDAQGQPPNIPFWLGEAPGRSDELSASVARLRD
TLDELLGEGQALPEGQRLEPAIAWLGATLGLDDGAARQIVEYLARARQALGGLPGSRRLV
MERFFDESGGMQLIIHSPHGSRLNRAWGLALRKRFCRSFNFELQAAATEDAIILSLSTSH
SFPLDEVWRYLHSASAEHLLVQAVLDAPLFGVRWRWNLTTSLGLPRYAGGRKVPPQLLRM
KSEDLLASVFPDQVACLENIVGEREVPDHPLVAQTLDDCLHEAMDCEGWLALLRDMESGA
VDLLARDLPAPSALAAEILTARPYAYLDDAPLEERRTQAVQNRRWSDPESADDLGALDLE
AIEAVRGEAWPEARNADEMHEALNSLGFLTSGEAEANPGWGEWLAQLSEQRRAGRLDCAG
STLWLAAERLPAMRLVHPAAKVPDAFQAPRGYPPPDSAEAATVELTRARLGGFGPRTAGQ
LAADLGIGLADQQYALAALEREGYVLRGRFSPGATEEEWCERHLLARIHRYTVKRLRREI
EPVERADFMRFLFDWQRLAPGTRGRGAESLATVVEQLEGFQAAAAAWESELLAARVADYA
SHWLDQLCRSGRIVWARLAGRSKAAGGPLRSAPIVLLPRRELGLWSVLQRDAPEPELSPR
AARVLEVLREQGASFFDELSQDAHLLRSELENALGELVSVGRVNADSFAGLRTLLMPADK
RSRQERRSRGLPGGMQDAGRWAPLRRAKAEEAGQRLPAEVLEHVARTLLRRYGVVAWRLL
EREADWLPPWRELLRVYHRLEARGEIRGGRFIAGLAGEQFALAEAVGLLREVRKRPPDGA
MLVVSAVDPLNLVGGLLPGERVPAVTGNRLLYRDGAPLAALVAGKVRMLAEVDGETAQQI
RALLIRRH
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgcctatttcatcctcttccgcccgccgcgccgagccggctccgcggcccctggcggag
ttccatcccgccgtccgccagtggttcgaacgccacttcgccgcgcccacgccggcccag
gtcgaggcctggccggcgatccgcgaggggctttcgaccctggtcgccgcgcccaccggt
tcgggcaagaccctgaccgccttcctcgccgccatcgatgccctggtggtggaggggctg
gccgccggcggcgagttggcggatgctacccaggtggtctatgtctcgccgctgaaagcg
ctgtccaacgacatccgcatcaacctggagcaaccgctggctggcatccgcgaggaactg
gcgcgtctcggcctgcccgacgtcgatatccgtagcgcggtgcgcaccggcgatacgccg
caggtcgaacgcggagcgatgcgcaagcgcccgccgcacatcctggtcaccacgcccgaa
tcgctgtacatcctgctcggctcggagtcgggccggcagatgcttgccggggtgcgcagc
gtgatcgtcgacgagatccatgccctggccggcagcaagcgcggcagccacctggcgctg
tcgctggagcgcctgcaggcgctgtgtccgcgaccgctgctgcggatcgggctgtccgcc
acgcagaaaccgatcgagaaggtcgcgcgcttcctcgtcggcgccagcggcaatccgcgc
gatccggcctgccggatcgtcgacatcggctatacgcgcccccgcgacctgggcatcgag
gtaccgccggtggcgctggaagcggtgatgtccaacgacacctgggagctggtctacgac
cgcctggcgcacctggccggcgagcaccgcaccaccctggtgttcgtcaacacccggcgc
atggccgagcgggtcacccgcttcctcgccgaacgcctcggcagccgccaggtggcggcc
caccacggcagcctggccaaagagctgcgcctggatgccgagcagcgcctcaaggccggg
caattgaaggtactggtggcgaccgcctcgctggagctgggcatcgatatcggcgacgtc
gagttggtctgccagttgtcgtcgccgcgctccatcgccgccttcctgcaacgggtcggg
cgttccgggcacagtgtcggcggcacccccaagggccggttgttcccgacctcccgcgac
gacctggtggaatgcgcggcgctgctcgacagcgtgcgccgtggcgagctggacagcctg
gtgctgccacgccagccgctggacgtgctggcgcagcagatcgtcgccgaagtggcctgc
caggagtggcgcgaggacgacctctatcggctggtgatccgcgccgaaccctacgccggg
ctggagcgcgagcgcttcgacgaagtcctgcggatgcttgccgagggctaccactcacgc
ctcggcgtgcgcggcgcctatctccatcgcgatgcgctcaacggcctgctccgtggccgc
cgtggcgcgcggctgaccgcgctgacctcgggcgggaccattcccgataccggcgactac
agcgtgctgctggagccgcagggcctgctggtggggacggtcaacgaagatttcgcggtg
gagagcctggccggcgatgtgttccagctgggcaacacctcgtaccggatcatccgcatc
gagccgggacgggtacgggtcgaggacgcccagggccagccgccgaacattccgttctgg
ctgggtgaggcgccggggcgcagcgacgagctgtcggccagcgtggcgcgcctgcgcgac
accctcgacgagctgctcggcgaaggccaggcattgccggaagggcagcggctggagcca
gccatcgcctggctcggcgccaccctcgggctggacgatggcgccgcgcggcagatcgtc
gagtacctggcccgcgcccgccaggccctgggtggcctgcccgggagccggcggctggtg
atggaacgcttcttcgacgaatccggcggcatgcaactgatcatccacagtccccacggc
agccgcctcaaccgcgcctggggcctggcgctgcgcaagcgtttctgccgcagcttcaac
ttcgagctgcaggcggcggccaccgaggacgcgatcatcctctcgctgtccaccagccac
agctttcccctcgacgaggtctggcgctacctgcattcggcgagcgccgagcacctgttg
gtacaggccgtgctcgacgcgccgctgttcggcgtgcgctggcgctggaacctgaccacc
tcgctcggtttgccgcgctatgccggcggtcgcaaggtgccgccgcaactgctgcggatg
aagagcgaggatctgctggccagcgtgttccccgaccaggtggcgtgcctggagaatatc
gtcggcgagcgcgaggtgcccgatcacccgctggtggcgcagaccctcgacgactgcctg
cacgaggcgatggattgcgagggctggctggccctgctgcgcgacatggagagcggcgcg
gtggacttgctggcgcgcgacctgccggcgccttcggcgttggcggcggagatactcacc
gcgcgtccctacgcctatctcgacgatgcgccgctggaggagcggcgtacccaggcggta
cagaatcgccgctggagcgatcccgagtccgccgacgacctcggcgccctggaccttgag
gcgatcgaggcggtgcgtggcgaggcctggccggaagcgcgcaacgccgacgagatgcat
gaggcgctgaacagcctgggcttcctcacctcgggcgaggccgaggccaatccgggctgg
ggggaatggcttgcgcaactgtcggagcaacgccgcgccggacgcctggactgcgcaggc
agcactctctggctggcggcggagcgcctgccggcgatgcgcctggtgcatcccgcggcg
aaggtgcccgacgctttccaggcgcctcgcggctatccgccgccggactcggcggaagcg
gcgaccgtggagctgacccgcgcccgcctgggtggcttcgggccacgcacggccgggcag
ttggcggccgacctgggcatcggcctggccgaccagcagtacgcgttggccgccctggag
cgcgaaggctatgtgctgcgtggccgcttcagtcctggcgcgacggaagaggagtggtgc
gaacgccatctgctggcgcgcatccatcgctatacggtgaagcgcctgcgccgggaaatc
gagccggtggagcgcgccgatttcatgcgtttcctgttcgactggcagcgcctggcgccg
ggcacccgtggccggggtgcggagtccctggctacggtggtcgagcagctggaaggcttc
caggccgcggcggccgcctgggaaagcgaactgctggcagcgcgggtggccgactacgcc
agccattggctggaccagctgtgccgttccggacgcatcgtctgggcgcgcctggccgga
cgcagcaaggccgccggcggtccgctgcgcagcgcgccgatcgtgctcctgccgcgccgc
gagctggggctctggagcgtcctgcagcgcgacgcgccggagccggaactgtcgccgcgc
gcggccagggtactggaggtgctgcgcgagcagggtgcatcgttcttcgacgaactgagc
caggatgcccacctgctgcgcagcgagctggagaacgccctcggcgagctggtctcggtc
ggccgggtcaacgccgacagcttcgccgggctgcgcaccctgctgatgccggcggacaag
cgcagccgccaggagcgccgctcgcgcggcctgccgggcggcatgcaggacgccgggcgc
tgggcgccgctgcgccgggcgaaggcggaagaggcggggcagcgtttgccggcggaggtt
ctcgaacatgtcgcccggaccttgctgcggcgctatggggtggtcgcctggcgcctgctg
gagcgcgaagccgactggctgccgccgtggcgcgagttgctgcgcgtctaccatcgcctg
gaagcgcgcggcgagattcgcggcgggcgcttcatcgccggcctggccggcgagcagttc
gccttggcggaagcggtcggcctgttgcgcgaggtgcgcaagcgaccgccggatggggcg
atgctggtggtgtcggcagtcgatccgttgaacctggtcggcggcctgctacccggcgaa
cgggtgccggcggtgaccggcaaccgcctgctctatcgagacggagcgccgctggcggcg
ctggtagccggcaaggtgcggatgctcgcggaagtcgacggcgagaccgcgcagcagatc
cgtgcgctgctgatccgccgtcactga

DBGET integrated database retrieval system