Pseudomonas aeruginosa c7447m: M802_3455
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Entry
M802_3455 CDS
T03098
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
paec
Pseudomonas aeruginosa c7447m
Pathway
paec00540
Lipopolysaccharide biosynthesis
paec01100
Metabolic pathways
paec01250
Biosynthesis of nucleotide sugars
Module
paec_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
paec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M802_3455 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
paec01005
]
M802_3455 (rfaD)
Enzymes [BR:
paec01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M802_3455 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
paec01005
]
Core region
M802_3455 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
DUF1707
DapB_N
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AGV63484
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Position
complement(3744506..3745498)
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AA seq
330 aa
AA seq
DB search
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLER
YARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRLLESSLELGVPFLYASSAAVY
GAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRM
ASVAYHCYQQLRRDGRVELFGEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNL
GSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL
ELLREAGYRDDFQSLEEGVAGYCRWLARSA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcgtcaccggcgccgccggcttcatcggcagcaatctgctgcaggcgctg
aaccggcgcggcgagaccgacatcatcgcggtggacgatctcaccgacggcgagcagttc
cgcaacctggcggacgccgatatcgccgactacctggaccagaacgacttcctcgagcgt
tacgcccgcggcgacttcggcacggtccgcgcgctgttccaccagggtgcctgcgccagc
accctggaaagcaatggccgctacatgatggagaacaactaccgctacagttgccgcctg
ctggaaagcagcctggaactcggcgtgccgttcctctacgcctcgtcggcggcggtctac
ggagccggccggaccttccgcgaggcgcgccagtacgagcggccgctgaacgtctacggc
tattccaagttcctcttcgaccagcgtgtgcggcgggcgctgccgcaggcgcgcagccag
gtggtcggcctgcgttacttcaacgtctacgggccgcgcgaggaacacaaggggcggatg
gcctcggtggcctaccactgctaccagcaattgcgccgcgatgggcgggtcgaactgttc
ggcgaacacggcggcttcccgcccggcggccacctgcgcgacttcgtcgcggtggaggac
gtggcgcgggtaaacctgcatttcttcgaccatccgcagcgttcgggaatcttcaacctc
ggcagcggccaggcacggaccttcaacgaggtcgccctggcggtgatcaatagcgtccgc
gccaacgccgaccagccgcccctgtcgctgcaacaggccgtggaaagcggcctgctcggc
taccgcgagttccccgagtcgctgcgggcgcgctaccagagccatacctgcgccgacctg
gagctgctgcgcgaggcgggctaccgcgacgatttccagagcctggaagagggcgtcgcc
ggctactgccgctggctggcgcgcagcgcctga
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