Pseudomonas aeruginosa c7447m: M802_4729
Help
Entry
M802_4729 CDS
T03098
Name
(GenBank) sigma-54 interaction domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
paec
Pseudomonas aeruginosa c7447m
Brite
KEGG Orthology (KO) [BR:
paec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paec03000
]
M802_4729
Transcription factors [BR:
paec03000
]
Prokaryotic type
Other transcription factors
Others
M802_4729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_22
AAA_16
NACHT
AAA_30
MCM
AAA_7
TniB
ATPase_2
AAA_14
AAA_2
AAA_33
AAA_19
ABC_tran
T2SSE
BrxC_BrxD
ResIII
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AGV63595
LinkDB
All DBs
Position
complement(5126975..5128570)
Genome browser
AA seq
531 aa
AA seq
DB search
MKRTVAIGFIGATLDRLGKGAARWQKWRPSIGLCQQPDLLIDRLELIHGNDARDLGLAER
IRADIAAVSPHTEVRLQQMELRNPWDFEEVYGALHDFVSAYPFDTEREDYLVHITTGTHV
AQICWFLLTEARYLPARLVQTSPSRRKDEARHPEGSATLIDLDLSRYDRIASRFRREQEE
SLALLKSGIATRNAAFNRSIEQIERVAVRSRAPMLLVGPTGAGKSFLARRIYELKRSRHQ
LDGRFVEVNCATLRGDGAMSALFGHVKGAFTGAQNAREGLLRAADGGMLFLDEIGELGAD
EQAMLLKAIEEKRFFPLGSDREVESDFQLIAGTHRDLRGRVAEGLFREDLFARINLWTFE
LPGLAGRREDIEPNIDFELERHAREQGRQVRFNLEAKRRYLAFAGSSEARWAGNFRELSA
SITRMATLADSGRIDEALVEEEILRLRQAWGLDAGREPLADLLGQRVEALDLFDRLQLQA
VLEVCRGAKTLSEAGRRLFAVSRQDKRNPNDADRLRKYLARFGLDWAQIRA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacggtcgccatcggcttcatcggcgccaccctcgaccgtctcggcaagggc
gcggcgcgctggcaaaagtggcggccgagcatcggcctgtgccagcagccggacctgctg
atcgaccgcctcgaactgatccacggcaacgacgcccgcgacctcggcctggccgagcgg
attcgcgccgacatcgccgcggtgtcgccgcataccgaggtccgcctgcagcagatggaa
ctgcgcaacccctgggacttcgaggaggtctatggcgccctgcacgatttcgtcagcgcc
taccccttcgacaccgagcgcgaggactacctggtgcatatcaccaccgggacccatgtc
gcgcagatctgctggttcctccttaccgaggcgcgctacctgccggcccggctggtgcag
acctcgccgtcgcggcgcaaggacgaggcgcgccatcccgagggctcggcgacgctgatc
gacctcgacctgtcccgctacgaccgcatcgcctcgcggttccgccgcgaacaggaggaa
agcctggctttgctcaagtcgggaatcgccacgcgcaatgccgctttcaaccgctccatc
gagcagatcgagcgggtcgccgtgcgttcgcgggcacccatgctgctggtggggccgacc
ggtgccggcaaatcgttcctcgcccggcgcatctatgaactcaagcgcagccggcaccag
ctcgacgggcgtttcgtcgaggtcaactgcgccaccttgcgcggcgacggcgcgatgtcg
gcactgttcggtcacgtcaagggcgccttcaccggcgcgcagaatgcgcgcgaaggcctg
ctgcgcgcagccgacggtggcatgctgttcctcgacgagatcggcgagctgggcgccgac
gaacaggcgatgctgctcaaggctatcgaagagaagcgcttcttcccgctgggttcggac
cgtgaggtggagagcgacttccagcttatcgccgggacccaccgcgacttgcgcggacga
gtggccgaaggcctgttccgcgaggacctgttcgcccgcatcaacctgtggaccttcgag
ctgccgggcctggctggacgccgcgaggacatcgagccgaacatcgacttcgaactggag
cggcacgcccgcgagcaagggcggcaggtgcgtttcaacctggaggccaagcgtcgctac
ctggccttcgccggttccagcgaagcgcgctgggccggcaacttccgcgagctgtcggct
tccatcacacggatggcgaccctggccgacagcgggcggatcgacgaggcgctggtcgag
gaggagatcctccgcctgcgccaggcctgggggctcgatgcgggccgggagccactggcc
gatctgctggggcagcgggtggaggccctggatctgttcgaccgcctgcaactgcaggcg
gtgctggaggtgtgccgcggggctaagaccctttccgaggcgggacgccggctgttcgcc
gtttcgcgccaggacaagcgcaaccccaacgacgccgaccggctgcgcaagtacctggcg
cgtttcggcctggactgggcgcagatacgcgcctga
DBGET
integrated database retrieval system
