Pseudohalocynthiibacter aestuariivivens: G5B38_01100
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Entry
G5B38_01100 CDS
T06463
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paed03032
]
G5B38_01100 (gyrA)
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_01100 (gyrA)
Enzymes [BR:
paed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
G5B38_01100 (gyrA)
DNA replication proteins [BR:
paed03032
]
Prokaryotic type
DNA Topoisomerases
G5B38_01100 (gyrA)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G5B38_01100 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QIE44238
LinkDB
All DBs
Position
complement(218300..221068)
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AA seq
922 aa
AA seq
DB search
MTDTPQTPEDTEENTPERPQYDGPTVSISDEMKTSYLDYAMSVIVSRAIPDLRDGLKPVH
RRILYAMHETTNTHDKPYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDG
QGNFGSMDGDNAAAMRYTEVRMAKVAGYLLADIDKDTVNFQPNYDGKDREPTVLPSRFPN
MLVNGAGGIAVGMATNIPPHNLGEVITATLALIDDPDLSSEQLIEYIPGPDFPTGGIMLG
SSGARKAYLEGRGSVIVRAKTRVEELRKDRWAIIIDEIPYQVNKATMIERIAETARDKKI
EGIAHVQDESDRNGVRVVIELKRDATAEVVLNQLFRFTPMQTYFGCNMLALNGGRPEQLT
LRRFLTSFITFREEVITRRTAYELRRARERSHILCGLAVAVSNVDEVVATIRSSADAAEA
REKLMTRRWPAGDILEYIALIDDPTHRANEDGTYNLSETQARAILELRLQRLTQIGVKEV
TDELQELAAKIKDYLAILASRERVMQIMTDELAEVRDLFAVPRRTEIVDWSGDMDDEDLI
EREDMVVTVTSGGYIKRTALADFRAQKRGGKGVGGMATKEEDVVTTLFVANTHTQLLFFT
TDGMVYKLKTWRLPQGGRTSKGKAIVNILPIPSGVSIAAIMPVDRDEAEWDDLQVVFATS
AGTVRRNKLSDFTNVKSNGKIAMKFEGEHEGTTLINARIASNDDDVMLVTSSGRAIRFLA
TDVRVFNSRASVGVRGIRLTGDDSVVSMSIIRHFDTDADERAAYLKMRRAMAGLADDAEG
TDDEGGDANAPLTQERYAAMSAAENLILTITAQGAGKLSSSHDYPLRGRGGMGVQAMDKA
MRGGDLVASFPVDLGDQIMLATSKGQSIRVPVDGISFRSRNAGGVKVFNTGKGELVVSVA
WIADQGDEAEDAENVAPDTGTP
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgatacgccacaaacccctgaagatacggaagaaaatacaccggaacgtccacag
tacgacggaccgacggtgtccatctccgacgagatgaagacttcgtatctcgattacgca
atgtcggtgatcgtcagccgtgcgattcccgatttgcgtgacgggctaaaaccggtgcat
cggcgcatcctttatgcgatgcacgaaaccaccaatacgcatgataaaccgtaccgcaaa
tcggcgcgccctgtcggtgatgtgatgggtaaatatcacccgcatggcgacagcgcgatc
tatgatgcgttggtgcgcatggcgcaggatttctcgatgtcgctgccgcttctggacggt
cagggcaactttggctcgatggatggcgataacgccgccgcgatgcgctataccgaagtg
cgcatggccaaggttgcaggctacctgctggccgacatcgacaaggacacggtcaacttt
cagccgaactatgatggcaaggatcgcgaaccgacggttctgccctctcgtttcccgaat
atgctggtcaatggcgcaggcggcatcgccgtcggtatggccaccaatatcccgccgcac
aatctgggcgaggtgatcaccgcgacactggcgctgatcgacgaccccgatctcagttcg
gaacaactgatcgagtacatccccggccctgatttcccgacgggtgggatcatgctgggc
agttccggcgcgcgaaaggcctatctggaggggcgcggcagtgtcatcgtacgggcgaaa
acccgtgtcgaggaactgcgcaaagaccgctgggcgatcatcatcgacgaaatcccctat
caggtgaacaaggccaccatgatcgagaggatcgccgaaaccgcccgcgacaagaaaatc
gagggcatcgcccacgtacaggacgaatccgatcgtaacggcgtgcgtgtcgttattgag
ctgaagcgggacgcgaccgccgaagtggtgctgaaccaactcttccgctttacgccgatg
caaacctatttcggctgtaacatgctggcccttaacggtggtcgccccgagcagctgacc
ctgcgccggttcctcacttccttcattacgttccgcgaagaggtgatcacgcgccgcacc
gcctatgaattgcgccgtgcccgcgaacgcagccacatcctgtgtggtctggccgtcgct
gtcagcaatgtcgacgaagttgttgccaccatccgctcctctgccgatgccgccgaagcg
cgcgagaagctgatgacccgtcgctggcctgcgggtgatattctggaatacatcgcgctg
atcgacgatcccacgcaccgcgccaacgaggacggcacctataacctgtctgaaacgcag
gcacgcgcgattctggagctgcggttgcagcgcctcacccagatcggcgttaaggaagtc
accgacgaactgcaagagctggccgcgaagatcaaagattatctcgccatcctcgccagc
cgcgaacgcgtcatgcagattatgaccgacgaactggcagaagtacgcgatctcttcgcc
gttccgcgccgcaccgaaattgtcgactggtctggcgacatggatgacgaagatctgatc
gagcgcgaggacatggtcgtgaccgtgacctctggtgggtacatcaaacgtaccgctctg
gcagatttccgtgcgcaaaagcgcggcggcaagggtgtcggtggcatggcgaccaaggaa
gaggacgtggtcaccactctctttgtcgccaacacgcatacccagctgttgttcttcacc
acggatgggatggtctacaagctcaagacatggcgcctgccccaagggggacgcacgtcc
aagggcaaggcgatcgtgaacatcctgccgatcccgtcaggcgtcagtatcgcggcgatc
atgccggtggaccgggacgaggccgaatgggacgatcttcaagtcgtctttgccacttcg
gcgggtaccgtgcggcgcaacaagctgtcggatttcaccaatgtgaaatccaacggcaag
atcgcaatgaagttcgaaggcgagcatgaaggcaccacgctgatcaatgcgcgcatcgcc
tcgaatgatgacgacgtcatgcttgtcacgtcatctgggcgggcgatccgctttcttgcg
acggatgtgcgggtattcaacagccgcgcgtcggtcggggtgcgcggcattcggttgacc
ggggatgacagcgttgtttcgatgtccatcatccgccatttcgatactgacgctgacgaa
cgcgccgcctacctgaaaatgcggcgcgcgatggcagggctggccgatgacgccgagggc
actgacgacgaaggtggcgacgccaatgcgcctctcacccaagaacgttatgctgcaatg
tcggctgccgaaaacctgatcctgacgatcaccgcacaaggcgcgggcaagctcagttcg
tcacatgattatccgctgcgcggacgcggcggcatgggcgtgcaggcaatggacaaggca
atgcgcggcggtgatctggtcgcctccttccctgtcgatctgggggatcagatcatgctg
gccacctccaaaggacagtcaatccgtgtgcccgttgatggtatttcgttccggtcgcgg
aatgcgggtggcgtcaaggtgttcaacaccggcaagggtgaattggtcgtcagcgtcgca
tggatcgcggaccagggcgacgaggcagaagatgccgaaaacgtggctccagacaccgga
accccgtag
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