Pseudohalocynthiibacter aestuariivivens: G5B38_02055
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Entry
G5B38_02055 CDS
T06463
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_02055
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
G5B38_02055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
AAA_22
SLFN-g3_helicase
AAA_30
TrwB_AAD_bind
AAA_16
T2SSE
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QIE44410
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Position
420292..421833
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AA seq
513 aa
AA seq
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MENKVFIGGGGPEYGEKQGLRLDYANRHGLIAGATGTGKTVTLQILAEGFSAAGVPVFLS
DVKGDLSGLAEAGSVDFKLHDAFTSRAAKIGFTDYSYQSFPVTFWDLFGQQGHPVRTTVA
EMGPLLLSRLMELTDAQEGIMNIAFRVADEDGMPLLDLKDLQALLVWIGENRDALSLRYG
NVSPQSVGAIQRQLMVLENQGGSALFGEPALELADLIRTDPDGRGRINILASDKLMGAPR
LYATFLLWLLSELFETLPEVGDPDKPKLVFFFDEAHLLFDDAPKALVDKVEQVARLIRSK
GVGVYFITQNPDDVPEDILGQLGNRIQHALRAFTARDRKALKRAAETYRPNARFSTVDAI
RDVGTGEAVTSMLESKGAPGVVERTLIRPPSSKLGPIDTAHRQKLMETSPIAGKYEALID
RRSAYEILKGRAETAAREAQTAEEAADEQSTAEREFNAGRRYSGKRVTRSSSRDEGFGTQ
FGKAISGAVIKEMKGTTGRRIVRGILGGLFKGR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaacaaggtctttatcggcggcggcgggccggaatacggtgaaaagcaaggactg
cgccttgactacgccaaccgtcacgggctgattgccggggccaccggtaccggcaagacc
gtcacgctgcaaattctcgcagaagggttctcggcggcgggcgtccctgtattcctgtcg
gatgtaaagggcgacctgtcggggctggcagaagccggcagcgtcgatttcaagttgcac
gacgcgttcaccagtcgcgctgccaagatcggttttactgattacagctatcaatcgttc
cccgtcacattctgggaccttttcggccaacagggccaccctgtcagaaccacggtggcc
gaaatggggcccttgctgctcagccgtctgatggaattgaccgacgcccaagagggcatc
atgaacatcgcctttcgcgtggccgacgaggacggcatgccgctgctggacctcaaggat
ttgcaggcactgctggtctggattggcgagaaccgcgatgcgctttcgctacgctacggg
aacgtctcgccgcaatccgtgggcgcgatccagcgccagttgatggtgctcgaaaatcag
ggcggtagcgcgctgtttggtgaacccgcgctggaactggccgatctgatccgcaccgat
ccggatggccggggccgcatcaatatcctcgcgtctgacaagctaatgggcgcgccgcgc
ctctacgccacgttcctgctgtggttgcttagcgaactgttcgagacgctgcccgaagtg
ggcgacccggacaaacccaagctggtctttttctttgacgaggcgcatctgctgttcgac
gatgcgccaaaggcgctggtggacaaggtcgagcaggtcgcgcgcctgatccggtccaag
ggggtaggtgtctatttcatcacccaaaatcctgatgatgtacccgaggatattctgggg
cagttgggcaaccggatacagcatgccctgcgcgcctttaccgcgcgcgatcgcaaggcg
ctgaaacgcgctgccgaaacctatcgccccaacgcgcgctttagcaccgttgacgcgatc
cgggacgtcggcacaggcgaggccgtgacctcgatgctcgaatccaagggcgcgcccggc
gtcgtcgagcgcacactgatccgaccgccatcgtcgaaactggggccaatcgacaccgcc
caccggcaaaaactgatggaaacctctcctatcgcgggcaaatatgaggcgttgatcgac
cgccggtctgcctatgagatcctcaaggggcgggctgaaacagctgcacgcgaagcacaa
accgccgaagaagcggcggatgaacaaagtaccgcagaacgcgaattcaatgcagggcgt
cgctactcgggtaagcgcgtgaccagatccagctctcgtgacgaagggttcggcacccag
ttcggcaaggccatcagcggtgccgtgatcaaggaaatgaaagggaccaccggccgccgt
atcgtgcgcggtatcctcggcgggctgtttaagggacgttga
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