Pseudohalocynthiibacter aestuariivivens: G5B38_02680
Help
Entry
G5B38_02680 CDS
T06463
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paed03009
]
G5B38_02680 (rimK)
Ribosome biogenesis [BR:
paed03009
]
Prokaryotic type
ribosomal protein modification factors
G5B38_02680 (rimK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Dala_Dala_lig_C
LysX_preATP_grasp
Motif
Other DBs
NCBI-ProteinID:
QIE44520
LinkDB
All DBs
Position
541727..543127
Genome browser
AA seq
466 aa
AA seq
DB search
MSPSEPVEPLQFGWEEWVGLPDLGVPAIRAKVDTGARTSALHAFDIETFGPVAKPKVRFT
VHPIPGRDDLIIPCSAPIIDRRDVTSSNGEKESRFVIQTNLSVNGDHWPIEITLTNRAGM
NSRMLLGRQALKDHISIVATDRFLQPELSYDVYHTAKMRQSAPDRALRIAVLSREDNYST
RRLVEEGEKRGHTVEVINTTRCYMAINAMAPEVHYDGKRLPRFDAVIPRIGASITPYGAA
ILRQFETIGTWCVNGSTGIVASRDKLHAHQIMARAKIGMPNTAFAASPRDTGNIIGLVGT
APLIVKLLESTQGKGVVLAETRKAAESVIDAFRGLKANFLVQDFVKEAAGEDIRCLVIGG
KVVASMKRTGAEGDFRSNLHRGGSAKSVRITKEERDTALRAAKAFDLNMAGVDLLRAEKG
PKVLEVNSSPGFEGIEGSTSKNIVGTLYEMIETRVRPAPIRRRKVK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccccatccgagccggttgaaccgttgcaattcggctgggaggaatgggtcggatta
ccggatctgggtgtgcccgcgatccgggccaaggtcgataccggtgctcgtacctcggcg
cttcatgcgttcgatatcgaaaccttcggacctgtggcaaaacccaaagtccgctttacc
gtgcatcccattccggggcgcgatgatctgatcatcccgtgttcggcaccgatcatcgac
cgacgcgatgtgacctcatcaaacggcgaaaaggaatcgcgcttcgtcattcagacgaac
ctttcggtgaacggtgaccattggccgatagagatcacgctgaccaaccgggcgggcatg
aacagccggatgttgctgggtcggcaggcgttgaaggatcacatctcgattgtcgcgacc
gaccggttcctacagcccgaactcagctatgatgtctatcacacagccaagatgcgccaa
tccgcacctgatcgtgcgttgcgtatcgcggtgctcagccgcgaggataactattcgacc
cgccgtctggtcgaagagggcgaaaagcgcggtcatacggtcgaggtaatcaataccacc
cgctgttacatggcaatcaacgcgatggcccccgaagtgcactacgatggcaaacgcttg
ccacgttttgatgcggtgatcccacgcatcggtgcgtcgatcacgccctatggtgccgcg
atcctgcgccagttcgaaaccatcggcacatggtgcgtcaacggcagcaccggcatcgtc
gccagccgggacaagctgcacgcccatcagatcatggcccgcgccaaaatcggtatgccc
aacacggcctttgccgccagcccacgcgataccggcaacatcatcggcctcgtcggcacc
gccccgttgatcgtgaaactgctggaatcgacccaaggcaagggtgtcgtgctggccgaa
acccgcaaggcggcggaatcggttatcgacgcctttcgcgggctcaaggcgaactttctc
gtgcaggatttcgtcaaggaagccgccggagaggatattcgatgtcttgtgatcggtggc
aaggtcgtggcctcgatgaaacgcaccggtgcagagggcgattttcgctcgaacctgcat
cgcggcggtagcgccaaatccgtgcgtatcaccaaggaagaacgcgataccgccctgcgc
gcggccaaggcttttgacctgaacatggccggtgttgatctgctgcgcgctgaaaaaggc
cccaaagtactagaggtcaattcctcccccggctttgaggggatcgaggggtcgacgagc
aagaatatcgtcggcacgctttacgagatgatcgaaacgcgcgtgcgtcctgcgccgatc
cgccgacgcaaggtcaagtaa
DBGET
integrated database retrieval system
