Pseudohalocynthiibacter aestuariivivens: G5B38_03050
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Entry
G5B38_03050 CDS
T06463
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed00010
Glycolysis / Gluconeogenesis
paed00020
Citrate cycle (TCA cycle)
paed00260
Glycine, serine and threonine metabolism
paed00280
Valine, leucine and isoleucine degradation
paed00310
Lysine degradation
paed00380
Tryptophan metabolism
paed00620
Pyruvate metabolism
paed00630
Glyoxylate and dicarboxylate metabolism
paed00640
Propanoate metabolism
paed00670
One carbon pool by folate
paed00785
Lipoic acid metabolism
paed01100
Metabolic pathways
paed01110
Biosynthesis of secondary metabolites
paed01120
Microbial metabolism in diverse environments
paed01200
Carbon metabolism
paed01210
2-Oxocarboxylic acid metabolism
paed01240
Biosynthesis of cofactors
Module
paed_M00009
Citrate cycle (TCA cycle, Krebs cycle)
paed_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
paed_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
paed_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
paed_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
G5B38_03050 (lpdA)
00020 Citrate cycle (TCA cycle)
G5B38_03050 (lpdA)
00620 Pyruvate metabolism
G5B38_03050 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
G5B38_03050 (lpdA)
00640 Propanoate metabolism
G5B38_03050 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G5B38_03050 (lpdA)
00280 Valine, leucine and isoleucine degradation
G5B38_03050 (lpdA)
00310 Lysine degradation
G5B38_03050 (lpdA)
00380 Tryptophan metabolism
G5B38_03050 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G5B38_03050 (lpdA)
00670 One carbon pool by folate
G5B38_03050 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paed04147
]
G5B38_03050 (lpdA)
Enzymes [BR:
paed01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
G5B38_03050 (lpdA)
Exosome [BR:
paed04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
G5B38_03050 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_oxidored
Biotin_lipoyl_2
Pyr_redox_3
NAD_binding_8
HI0933_like
GIDA
AlaDh_PNT_C
FAD_binding_2
GCV_H
NQRA_N
HlyD_D23
QRPTase_N
3HCDH_N
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
QIE44589
LinkDB
All DBs
Position
complement(623734..625470)
Genome browser
AA seq
578 aa
AA seq
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MDVKVPDIGDFKDVPVITVLVAVGDTVAEEDPLIELESDKATMEVPSPAAGKVTEIKVSE
GDKVTQGDVIMVLEGADAGDSTDDAPKADPETTSPKSVAATGSAKGKGDMHAEIVVLGSG
PGGYTAAFRAADLGKDVILIEKYPTLGGVCLNVGCIPSKALLHAAKVITEAEEMGEHGIS
FAKPKVDIDALRGWKDGVVSQLTGGLKGLAKARKVKTVTGYGRFAGPNMIEVEGADGTTT
VSFDQCIIAAGSESVKLPFIPHDDPRVVDSTGALELDGVPKRLLVLGGGIIGLEMACVYD
ALGAKVTIVEFMDQIIPGADKDIVKPLMKRIDARYEAIALKTKVTAVEAQKKGLKVTMEG
PDGEVTDTFDKVLVAVGRRPNGKAIGAEAAGVAVDERGFIAVDKQQRTGVGHIFAIGDVV
GQPMLAHKAVHEGKVAAEVAAGHKRVFDARVIPSVAYTDPEVAWVGLTETEAKSKGIKIG
KGVFPWAASGRALSNGRSEGMTKVIFDPEDDRVLGAAIVGTNAGELIAEVALAIEMGADA
VDLGHTIHPHPTLSETVNFAAEMYEGTITDLMPPRKRT
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaaagtacccgatatcggcgacttcaaagacgtgcccgtgatcactgtgctg
gtggccgtgggtgatacggtcgcagaagaggacccgttgatcgaactggagagcgacaag
gcgacgatggaagtgccgagcccagccgctggcaaggtaacagaaatcaaggtgagcgag
ggtgacaaggtcacccaaggcgacgttatcatggtgctggaaggcgcagatgcaggtgac
agcaccgatgacgcgccaaaagccgatccagaaacgacatcgccaaagtcggtcgcggcc
accggaagcgccaagggcaagggcgacatgcacgccgagatcgtcgtgctcggttctggt
cccggcggctatacggcggcttttcgcgccgctgatctgggcaaggacgtaatcctgatc
gagaaatatccgacgctgggcggtgtctgcctgaacgtgggttgtattccgtccaaggca
ttgttgcacgccgccaaggtgataaccgaagccgaggaaatgggcgaacatggtatcagt
tttgccaagcccaaggttgatatcgacgctctgcgcggctggaaagatggcgttgtcagt
cagttaaccggtggtcttaaaggtctggcaaaggcgcgcaaagtcaaaaccgtgaccggg
tatggtagattcgccggcccgaacatgattgaagtcgaaggcgctgacggcaccacgacc
gttagttttgaccaatgcatcatcgccgctggttcggaatcggtgaagctgccattcatt
ccgcatgacgatccccgcgttgtcgacagcaccggcgcgctggaactggacggtgtgccc
aagcgcttgttggtattgggtggcggaatcattggactggagatggcgtgcgtctatgac
gcgctgggtgccaaggtgaccatcgttgaattcatggatcagattatccccggcgcagat
aaggacatcgtaaagccgctgatgaagcgtatcgacgcacgctatgaagcgattgcattg
aaaaccaaggtaaccgctgtcgaggcccagaaaaaaggcctcaaggttacgatggaaggc
cccgacggcgaagtgacagatacctttgacaaggtattggtggcagtggggcgtcgccct
aacggcaaggcgattggtgccgaggcggcaggtgtcgcagtcgacgagcgcggctttatt
gcggtggacaagcagcaacgcaccggggtgggtcatatttttgcgatcggcgatgtggtc
gggcagccgatgctggcgcataaggccgtgcatgaaggtaaggtcgcggccgaagtcgct
gcgggacacaaacgcgtctttgatgcgcgcgtcatcccatcggtggcctatactgatccc
gaagtggcatgggtcggtctgaccgagacagaggcgaaatcaaagggtatcaagatcgga
aagggcgtttttccttgggccgcgtctggccgggcactgtccaacggacgttcggagggg
atgaccaaggttatctttgatcccgaagacgaccgtgtgctcggggctgccatcgtcggc
accaacgcgggcgaactgattgccgaggtggcgctggccattgagatgggcgcggacgcc
gtcgatctggggcataccattcacccgcacccgacgctgagcgagacggttaactttgcc
gccgagatgtacgagggtacgatcaccgatctcatgccaccgagaaagcggacgtga
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