Pseudohalocynthiibacter aestuariivivens: G5B38_03190
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Entry
G5B38_03190 CDS
T06463
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
paed
Pseudohalocynthiibacter aestuariivivens
Pathway
paed03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5B38_03190 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paed03400
]
G5B38_03190 (uvrA)
DNA repair and recombination proteins [BR:
paed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5B38_03190 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G5B38_03190 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_25
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_21
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QIE44614
LinkDB
All DBs
Position
complement(654147..657032)
Genome browser
AA seq
961 aa
AA seq
DB search
MAELKNIEVRGAREHNLKNIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMQKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYMRLLYARAGT
PYSPATGKPIEAQQVQDMVDRIMGMEEGTRAYLLAPIVRDRKGEYRKEFLELRKTGFQRV
KVDGAFYELDDPPTLDKKFRHDIDVVVDRIVVREGLETRLADSLRTALDLADGIAILETA
PTDADPERITFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPVCDGLGMELFFDERLVVP
DQNLKIYDGALAPWRKGKSPYFLQTIEAIAKHYEFDQNTRWKDLDAHVQQVFLHGSGDEE
IPFRYDEGGRVYQVTRVFEGVIPNMERRYRETDSNWVREEFERYQNNRPCGACEGYRLRE
EALAVKIGSASGGQNQLLHVGQVVQMSIREALAWVEEVPNHLSKQKNEIARAILKEIRER
LGFLNNVGLEYLTLSRNAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDR
LLGTLKNLRDQGNTVIVVEHDEEAIREADYVFDIGPGAGVHGGQVVSHGVPSVVAADANS
ITGQYLSGTREISIPAVRRKGNGKKLKVVKASGNNLKEVTAEFPLGKFVCVTGVSGGGKS
TLTIETLFKTASMRLNGARQTPAPCETIKGLEHLDKVIDIDQRPIGRTPRSNPATYTGAF
TPIRDWFAGLPESKARGYKPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCETCQG
ARYNRETLEIKFKGKSIADVLDMTVEDAQTFFQAVPSIREKMDALVRVGLGYIKVGQQAT
TLSGGEAQRVKLSKELAKRSTGRTLYILDEPTTGLHFEDVKKLLEVLHELVEGGNTVIVI
EHNLDVIKTADWIIDIGPEGGDGGGEIVAVGTPEKIADEVRSHTGRYLKPMLVPKNKVAA
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttgaagaacatcgaggtgcgcggcgcgcgcgagcataatctgaagaatatc
gacgtggatattccgcgcgaccagcttgtggtcattacaggcctaagcgggtcgggtaaa
tcttcgcttgcgttcgatacgatctatgccgaagggcagcgccgctatgtggaatcgctg
tcggcatatgcgcggcagtttctggacatgatgcaaaagccggacgtagaccacatcagt
ggcctcagccccgcgatcagcatcgagcaaaagaccaccagtaaaaacccccgttcgacc
gtcggcactgtgaccgagatatacgactacatgcgcctgctctatgcgcgcgccggtaca
ccctatagccccgccaccggcaagccgatcgaggcgcagcaggtacaggacatggtcgac
cgcatcatgggaatggaagagggcacacgcgcctatctgctggcgccgattgtgcgggat
cgcaaaggcgagtaccgcaaggaattcttggagttacgcaagaccggttttcaacgggtc
aaggtggatggcgcgttctacgagttggatgatccgccgacgctggataagaagttccgc
cacgatattgacgtggtcgtggaccggatcgttgtgcgcgagggtctggagacgcggctg
gcggatagtctgcgcaccgcgttggatctggccgatggcattgccattctggaaaccgcc
ccgacggacgctgatcctgaacgcattacgttctccgagaaatttgcgtgtcctgtcagc
ggctttaccattcccgagattgagccacggctgttctccttcaacgcaccattcggggcg
tgcccggtttgcgacgggttggggatggagttgttctttgatgagcggttggtcgtgccg
gaccaaaacctgaaaatttacgatggcgcgttggcaccgtggcgcaagggcaagagcccg
tattttctgcaaaccatcgaagcgatcgccaagcattacgagttcgaccagaatacccgg
tggaaagatctggatgctcatgtgcagcaggtgtttttacatgggtcgggtgatgaggag
atcccatttcgctacgacgagggcggccgcgtttatcaggtcacgcgtgtgttcgagggt
gtaatcccgaacatggagcgacgctatcgcgagacagatagcaattgggtacgcgaggag
tttgaacgctaccagaacaatcgtccttgcggtgcctgcgagggctaccgcctgcgcgaa
gaggctttggctgttaagatcggctctgccagtggtgggcagaaccagctgctgcatgtt
gggcaggtggtccagatgtccatccgcgaggcgctggcatgggtcgaggaggtcccgaac
catctaagcaagcagaagaacgaaattgcccgtgcgatcctgaaggaaatccgtgagcga
cttggattcctgaacaatgtgggcctcgaatacctgacgctgagccgcaatgccggcacg
ttgtccggaggtgaaagccaacgcatccggttggcatcgcagatcggttcagggctgacc
ggggtactctacgtgttggatgagccgagcatcggacttcaccagcgcgacaatgacagg
ctgttgggcacactcaagaacctgcgcgatcagggtaacacggtgatcgtggtagagcat
gacgaagaagcgatccgcgaggcagactacgtctttgatattggtcccggtgccggggtg
catggcggacaggtcgtcagccatggcgtgccatctgtggtagccgcggatgcgaattcg
atcaccgggcaatacctgtcaggaacgagagagatttcgatccccgcagtgcgacgtaag
gggaatggcaaaaaattgaaggttgtcaaagcgtcaggtaacaaccttaaagaagttaca
gccgaattcccgctggggaaattcgtctgtgttaccggcgtgtcgggcggtggcaagtcg
acgctgaccatcgagacgctattcaaaactgcctcgatgcggttgaacggtgcgcgtcag
acgccagccccctgtgagacaatcaaggggctggagcatctggacaaggtgatcgacatt
gatcagcgtccgatcggccgcacacctcgttcgaaccccgcgacctataccggcgcgttc
acaccgatccgcgattggttcgcgggattgcccgaatctaaggcgcgcggctacaagccg
ggtcggttcagtttcaacgtcaagggcgggcgttgcgaagcgtgtcagggagatgggcta
atcaagattgagatgcattttctcccagatgtctatgtcacctgcgagacgtgccagggc
gcgcggtataatcgcgaaactttggaaataaagtttaaaggcaagagcatagccgatgtt
cttgatatgacggtcgaggacgcgcagaccttttttcaggcggtgccgagtatccgcgag
aagatggacgcgctggtacgtgtcggccttggctatattaaggtgggtcagcaggccacg
acgctatcaggtggcgaagcgcaacgcgtgaaactgagcaaggaactggcgaaacggtcg
accggacgtacgctctatattctggatgagcccacgacggggctgcatttcgaggatgta
aagaagctgctcgaggtgctgcatgagttggtcgagggcggcaacacggtgatcgtgatc
gagcataaccttgatgtgatcaagaccgctgactggatcatcgacatcggccccgaaggc
ggagatggcggaggagagatcgttgccgtaggcaccccggaaaagatcgctgacgaggtg
cgcagccacacggggcgctatcttaaaccgatgcttgtgccgaaaaacaaggtcgcggcg
gaataa
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